Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g02975 | ATGCAAATTTACTCTCTCCTTTACCTATTTCTCTCCCTTATCTCTCTCCTCTTCGCTTTCAACCTCCGCACCCGCCGTACAAACTTACCCCCCAGTCCCCCGTCTCTCCCTATCATCGGCCACCTCCATTACCTCAAAATCCCCCATCACCAAACTTTACACAAACTCTCTGCGCAATACGGACCAGTAATCTCTCTCTGGCTTGGATCTCGCCTCGTTGTGGTCGTCTCCTCGTTGCCGGCAGTGGAGGAGTGTTTCACTAAGAACGACATTGTTTTAGCCAACCGTCCTCGCTTGCTAGTCGGGAAACACATCAGCTACAACTACACTACGATGGTATCGTCACCTTATGGAGATCACTGGCGGAACCTCCGCAGAATCGGCGCGATCGAGATCTTTTCAGCGTCTCGCCTCAATAAATTCGCAGGAAGCCGGAAGGATGAAGTGGAACGGTTACTGAAGAAGCTATCGAGAAATTCGATGTATGGATTCTCGAAAGTAGAGATGCAGTCGGCGATTTCGGAACGGACGTTTAACATATCGATGAGAATGGCGGCAGGAAAGAGGTATTTTGGTGAGGAGGTGAGGGATGTGGAGGAAGCGAGACAGTCGAGAGAGCTGATTAAACAGATCGTGTCGATGGGAGGAGTATCGTATCCGGGAGATTTCATTCCGATGATGAATTGGATCCCGAATGGATTTAAGAGGAAGGTTTGGAGAGTTGCGAAGAGGATGGACGCGTTTCTGCAGGGATTGATTGATGAACATCGGAGCAATAAGGAAGAAGAAAGGAACACGGTGATCGGTCATTTGCTATCTCTGCAGGAAATGGAGCCTGAGTACTATGGAGATGAAATAATCAAAGGAATTGTTCTGTTACTACTAGCAGGAGTAGACACTTCAGCTGTGACAATTGAATGGATTCTAGCTCATTTGCTCAACAATCCAGATGTACTAAAAAAGGCTAGAGAAGAGATAGACGCTCAAATTGGAGAAAAACGACTTGTAGAAGAATCGGATATCCCCAAGTTACCATATCTTCAAGGAATCATCTCTGAGACTCTTCGATTGAACCCAACTGCTCCAATGCTAGTGCCACATCTAACCTCCCATGATTGTACAATCAGCGGGTACAAAATACCACGTGACACAATTGTATTGGTTAATGCATGGGCTATCCATAGAGACCCTAATCAATGGGAAGAACCCATGCTATTCAAACCGGAAAGACACCAAAAGTCATCAGAATCAATTGATCACCATCAAATCCCAAAGTTGATTCCATTTGGAGTCGGACGAAGAGCTTGCCCTGGCTCGGGCATGGCTCAACGAGTGGTGGGATTGACTCTAGCGGCTTTAATTCAATGCTACGAGTGGGAAAGGATTGGTGAGGAGAAAGTGGACATGGCAGAAGGAAGAGGGGCCACCATGCCCAAGGTGTTGCCATTGGAAGCTATGTGCAAACCTCGCTCTATCATCCACAACATTTTTAACTGA | 1497 | 46.83 | MQIYSLLYLFLSLISLLFAFNLRTRRTNLPPSPPSLPIIGHLHYLKIPHHQTLHKLSAQYGPVISLWLGSRLVVVVSSLPAVEECFTKNDIVLANRPRLLVGKHISYNYTTMVSSPYGDHWRNLRRIGAIEIFSASRLNKFAGSRKDEVERLLKKLSRNSMYGFSKVEMQSAISERTFNISMRMAAGKRYFGEEVRDVEEARQSRELIKQIVSMGGVSYPGDFIPMMNWIPNGFKRKVWRVAKRMDAFLQGLIDEHRSNKEEERNTVIGHLLSLQEMEPEYYGDEIIKGIVLLLLAGVDTSAVTIEWILAHLLNNPDVLKKAREEIDAQIGEKRLVEESDIPKLPYLQGIISETLRLNPTAPMLVPHLTSHDCTISGYKIPRDTIVLVNAWAIHRDPNQWEEPMLFKPERHQKSSESIDHHQIPKLIPFGVGRRACPGSGMAQRVVGLTLAALIQCYEWERIGEEKVDMAEGRGATMPKVLPLEAMCKPRSIIHNIFN* | 499 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25719827 | 25723848 | - | CsaV3_6G043610.1 | Csa06g02975 | 534602 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g02975 | 498 | SUPERFAMILY | Cytochrome P450 | 30 | 490 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | Coils | Coil | 319 | 339 | - | - | |
Csa06g02975 | 498 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 429 | 438 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 285 | 302 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 57 | 76 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 305 | 331 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 348 | 366 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 176 | 194 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 389 | 413 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | E-class P450 group I signature | 81 | 102 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 495 | - | - | |
Csa06g02975 | 498 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 4 | 495 | - | - | |
Csa06g02975 | 498 | Gene3D | Cytochrome P450 | 19 | 490 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | Coils | Coil | 139 | 159 | - | - | |
Csa06g02975 | 498 | Pfam | Cytochrome P450 | 30 | 477 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | P450 superfamily signature | 296 | 313 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02975 | 498 | PRINTS | P450 superfamily signature | 349 | 360 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g02975 | Csa-Chr6:25719827 | Csa06g02977 | Csa-Chr6:25728642 | 0 | dispersed | |
Csa06g02975 | Csa-Chr6:25719827 | Csa06g02976 | Csa-Chr6:25725649 | 0 | tandem | |
Csa04g02454 | Csa-Chr4:24605411 | Csa06g02975 | Csa-Chr6:25719827 | 6.46E-162 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g02975 | K13260 | - | csv:101215922 | 951.814 |