Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g02979 | ATGGATTTAGACACTTACGTCCTCTATTCTTCTCTCTCACTTTTCTTTCTTCTTCTTGCTTTCAAATTCATCTCTCGATCTCTTCGACTTCGCAATAACTTACCGCCAAGTCCACCCTCTTTTCCGGTCATCGGACATCTCCATCTCTTGAAAAAGCCAATCCACCGAACTTTCAGCAACCTCTCTGCCAAATATGGCCCTGTTATGTCTCTCCGCCTTGGATCCAAGCTTGCAGTCGTTTTATCCTCCTCGGCGGCGGTGGAGGACTGCTTCACTAAAAACGACGTTGTTCTCGCCAACCGTCCACGTTTGCTCGTTGGAAAATACATCGGCTATAATTACACTACCATGATTGGGGCTCCATACGGCGACCATTGGCGGAACCTTCGTCGAATTGGCGCCATTGAGATCTTCTCTATATCTCGAATCAACAAATTCACGGACATCCGAAGGGATGAAGTGATGCGAATTGTTCGAAAACTGTCACATAATTCGATTCATCAATTCTCGAAAGTAGAAATTCAATCGGCGATGTCGGAGCTGACGTTCAACATCACGATGAGAATGGCGGCTGGTAAAAGGTATTATGGCGAGGACGTGACGAATGAGGAAGAGGCGAGGAGGTTTAGGGAGTTGATTAAAGAGATTGTGGCGGTAGGAGGAGTATCAAATCCAGGGGATTTCTTACCTGTATTGAATTGGATGTCGAAGGGTATTGAGAGGAAATTAATACAACTGGGGAAGAAAGTGGATGCGTTCTTGCAAGGGCTAATTGATGACCATCGTAAGACGAAGGAAGAAGGAAGGAACACGATGATCGATCACTTGCTTTCTCTACAACAATCGGAACCCGATCACTATAACGATCAGATAATCAAAGGATTTATATTGATATTACTAACGGCTGGATCCGACACATCCGCGGTGACAATGGAATGGGCCTTGAGTCATCTCCTAAACAATCCTCAAGTGTTAAAAAAGGCAAAAGAGGAGATAGACACTCAAATTGGACAAGAAAGACTCGTGGAGGAATCAGACATTTCTAAACTACCTTATCTTCAAAGAATCGTCTCTGAGACTCTTAGGTTGAATCCTGCGGCACCCATGTTGGTTCCCCATTATGCAACCAATGACTGCAAAATATGTGGGTATGATGTGCCACGAGACACAATGGTACTAGTCAATGCTTGGGCCATACATAGAGATTCAAACGAGTGGGAGGATTGCATGAGTTTTAAACCAGAGCGATACGAAAAATCAGAAGCTGTAGAGATACACAAGTTTTTGCCTTTTGGATTAGGAAGGCGTGCATGTCCTGGTTCTGCCATGGCACATAGAGTGATGGGTCTTACTTTAGCAACTCTGATTCAATGTTTTGAGTGGAAGAAAATTGGAGAAGAAGACATTGACATGAAGGAGTTGTCTGGTGCCATAATGACCAAGATGGTGCCATTGGAGGCCATGTGCAAAGCTCGACCCATCATCAACAACATTTTTTACTAA | 1503 | 44.18 | MDLDTYVLYSSLSLFFLLLAFKFISRSLRLRNNLPPSPPSFPVIGHLHLLKKPIHRTFSNLSAKYGPVMSLRLGSKLAVVLSSSAAVEDCFTKNDVVLANRPRLLVGKYIGYNYTTMIGAPYGDHWRNLRRIGAIEIFSISRINKFTDIRRDEVMRIVRKLSHNSIHQFSKVEIQSAMSELTFNITMRMAAGKRYYGEDVTNEEEARRFRELIKEIVAVGGVSNPGDFLPVLNWMSKGIERKLIQLGKKVDAFLQGLIDDHRKTKEEGRNTMIDHLLSLQQSEPDHYNDQIIKGFILILLTAGSDTSAVTMEWALSHLLNNPQVLKKAKEEIDTQIGQERLVEESDISKLPYLQRIVSETLRLNPAAPMLVPHYATNDCKICGYDVPRDTMVLVNAWAIHRDSNEWEDCMSFKPERYEKSEAVEIHKFLPFGLGRRACPGSAMAHRVMGLTLATLIQCFEWKKIGEEDIDMKELSGAIMTKMVPLEAMCKARPIINNIFY* | 501 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 25742453 | 25744708 | - | CsaV3_6G043650.1 | Csa06g02979 | 534606 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g02979 | 500 | SUPERFAMILY | Cytochrome P450 | 35 | 492 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | Gene3D | Cytochrome P450 | 21 | 491 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 8 | 496 | - | - | |
Csa06g02979 | 500 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 431 | 440 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g02979 | 500 | Pfam | Cytochrome P450 | 35 | 481 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 86 | 107 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 311 | 337 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 354 | 372 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 395 | 419 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 428 | 438 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | E-class P450 group I signature | 438 | 461 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | P450 superfamily signature | 355 | 366 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | P450 superfamily signature | 429 | 438 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PRINTS | P450 superfamily signature | 438 | 449 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g02979 | 500 | PANTHER | CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED | 8 | 496 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa02g02727 | Csa-Chr2:23724960 | Csa06g02979 | Csa-Chr6:25742453 | 0 | dispersed | |
Csa04g02453 | Csa-Chr4:24601161 | Csa06g02979 | Csa-Chr6:25742453 | 0 | dispersed | |
Csa04g02454 | Csa-Chr4:24605411 | Csa06g02979 | Csa-Chr6:25742453 | 2.62E-172 | dispersed | |
Csa06g00754 | Csa-Chr6:6103772 | Csa06g02979 | Csa-Chr6:25742453 | 0 | dispersed | |
Csa06g00756 | Csa-Chr6:6111799 | Csa06g02979 | Csa-Chr6:25742453 | 0 | dispersed | |
Csa06g02976 | Csa-Chr6:25725649 | Csa06g02979 | Csa-Chr6:25742453 | 0 | dispersed | |
Csa06g02977 | Csa-Chr6:25728642 | Csa06g02979 | Csa-Chr6:25742453 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g02979 | K13260 | - | csv:101215449 | 956.051 |