Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g02998 ATGGCCAACCCCGTTTGGATGTTTTTACTTCTCTGTTTCTTCTCTGTGCCGTCCATGGCTGTCGGAGACAAGAAGACCTACATCGTGCATATGGCTAAATACCAAATGCCCGAGAGTTTTGAGCACCATTTGCACTGGTATGACTCCTCACTCAGATCGGTGTCCGATTCCGCTGAGATGATCTATGCGTACAACAACGTGGTTCATGGGTTTTCAACCAGACTGACGGCGGAGGAAGCTCAGCGGCTGGAAGCCCAACCTGGGATTCTGGCTGTGGTGCCTGAGATGATATATGAACTTCATACCACTCGTTCTCCAGAGTTTCTTGGGCTTGACAAGAATGCGAATCTTTACCCTGAATCCAACTCCGTGTCGGAGGTTATCATTGGAGTTTTGGATACTGGGATTTCGCCGGAGAGTAAGAGCTTTGATGATACAGGGCTTGGACCAGTTCCGAGTAGCTGGAAAGGTGAGTGTGAATCGGGTACTAATTTTAGTGCGTCGAACTGTAACAGGAAGCTGGTTGGAGCTAGATTTTTCTCTAAGGGCTATGAGGCAACTCTGGGTCCGATCGATGAATCTAAAGAATCTAGATCTCCGAGAGATGACGATGGCCATGGAACCCACACCGCTTCCACTGCGGCCGGTTCTGTAGTTGAAAACGCAAGTCTATTTGGGTATGCCTCGGGTACCGCCCGTGGAATGGCCGCGCGTGCGAGAGTCGCCGCCTACAAGGTTTGCTGGGCTGGCGGATGTTTCAGCTCTGATATCGTTGCCGCCATTGACAAGGCTGTGGACGACAATGTTAACGTGCTTTCCATGTCGCTTGGGGGTGGAGTATCCGATTATTACAAAGACAGTGTGGCCACCGGAGCCTTTGCTGCCATGGAGAAAGGCATCCTCGTTTCTTGCTCTGCTGGAAATGCCGGCCCCAGTCCTTTCAGTTTGTCAAATACGTCTCCATGGATTACAACAGTCGGCGCTGGAACATTAGATCGTGATTTTCCGGCGTATGTCAGTCTTGGAGACGCCAAGAACTTCTCCGGCGTTTCCCTCTATCGAGGCAAGTCATTGCCGGGAACATTGTTGCCTTTTATTTACGCTGCTAATGCGAGTAACTCCGGTAATGGAAATTTGTGTATGACTGGTACTTTGATCCCTGAAAAGGTCGCCGGAAAGGTCGTTTTCTGTGACCGAGGTGTAAACCCTAGGGTTCAGAAAGGTGCAGTCGTCAAAGCCGCTGGTGGAATCGGAATGGTGCTGGCCAATACCGCAGCAAATGGAGAAGAGTTGGTGGCCGACTCTCATCTTCTGCCGGCCACGGCGGTGGGTCAGAAATCTGGCGACACTATACGAAAGTATCTCGTTTCGGACCCGAGTCCGACGGTGACGATCTTATTCGAAGGAACTAAATTAGGGATCGAACCATCACCGGTTGTGGCGGCGTTTAGTTCCCGTGGACCAAATTCGATCACTCCTCAGTTGCTGAAGCCCGACATAATAGCCCCTGGCGTCAACATCTTAGCTGGATGGTCAAAATCAGTGGGACCAAGTGGTTTAGCCATTGATGACAGACGAGTGGATTTCAACATTATCTCCGGAACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCTGCTCTGATCAAGGGTGCTCATCCCGATTGGAGTCCGGCGGCGATTCGATCGGCGTTGATGACAACAGCCTACACAGCCTACAAAAATGGCCAAAAGATCCAAGATATCGCCACCGGAAAACCATCCACCCCATTCGATCACGGAGCCGGACACGTGGATCCCGTATCAGCCCTCAATCCAGGTCTTGTTTACGATCTAACGGTGGACGATTACCTGAACTTCCTCTGCGCACTCAACTACACTCCATCGCAGATCAACTCACTGGCAAGGAAAGATTTCACTTGCGACTCCAAGAAGAAGTACAGTGTCAACGATCTCAACTACCCTTCTTTCGCCGTCGTCTTTGAAGGCGTATTAGGCGGCGGAGGCAGTGGTTCCAGTGTAGTAAAGCACACTAGAACACTCACAAACGTCGGCTCTCCAGGAACCTACAAAGTCTCAATCACGTCGGAGACCAAATCAGTGAAAATCTCCGTGGAGCCGGAATCATTGAGCTTCACCGGAGCCAATGATAAGAAGTCTTACACAGTCACATTCACCACCACGACCAGTTCGGCGGCGCCAACGAGTGCAGAAGCGTTTGGTCGAATTGAGTGGTCGGACGGGAAACACGTGGTGGGAAGTCCGATTGCGTTTAGCTGGACGTAG 2286 51.27 MANPVWMFLLLCFFSVPSMAVGDKKTYIVHMAKYQMPESFEHHLHWYDSSLRSVSDSAEMIYAYNNVVHGFSTRLTAEEAQRLEAQPGILAVVPEMIYELHTTRSPEFLGLDKNANLYPESNSVSEVIIGVLDTGISPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLVGARFFSKGYEATLGPIDESKESRSPRDDDGHGTHTASTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDIVAAIDKAVDDNVNVLSMSLGGGVSDYYKDSVATGAFAAMEKGILVSCSAGNAGPSPFSLSNTSPWITTVGAGTLDRDFPAYVSLGDAKNFSGVSLYRGKSLPGTLLPFIYAANASNSGNGNLCMTGTLIPEKVAGKVVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQKSGDTIRKYLVSDPSPTVTILFEGTKLGIEPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDIATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTPSQINSLARKDFTCDSKKKYSVNDLNYPSFAVVFEGVLGGGGSGSSVVKHTRTLTNVGSPGTYKVSITSETKSVKISVEPESLSFTGANDKKSYTVTFTTTTSSAAPTSAEAFGRIEWSDGKHVVGSPIAFSWT* 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 25857587 25861278 - CsaV3_6G043840.1 Csa06g02998 534625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g02998 761 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Csa06g02998 761 Pfam Peptidase inhibitor I9 26 101 IPR010259 -
Csa06g02998 761 Gene3D Peptidase S8/S53 domain 127 617 IPR036852 GO:0004252|GO:0006508
Csa06g02998 761 Gene3D - 332 473 - -
Csa06g02998 761 ProSiteProfiles Serine proteases, subtilase domain profile. 97 604 - -
Csa06g02998 761 Pfam Fibronectin type-III domain 651 757 IPR041469 -
Csa06g02998 761 Gene3D - 621 760 - -
Csa06g02998 761 CDD PA_subtilisin_like 338 465 - -
Csa06g02998 761 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 16 759 IPR045051 -
Csa06g02998 761 MobiDBLite consensus disorder prediction 190 213 - -
Csa06g02998 761 SUPERFAMILY Subtilisin-like 100 608 IPR036852 GO:0004252|GO:0006508
Csa06g02998 761 MobiDBLite consensus disorder prediction 190 208 - -
Csa06g02998 761 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 16 759 - -
Csa06g02998 761 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 101 IPR037045 -
Csa06g02998 761 Pfam PA domain 380 451 IPR003137 -
Csa06g02998 761 PRINTS Subtilisin serine protease family (S8) signature 124 143 IPR015500 -
Csa06g02998 761 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Csa06g02998 761 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Csa06g02998 761 CDD Peptidases_S8_3 98 570 IPR034197 -
Csa06g02998 761 Pfam Subtilase family 125 574 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02995 Csa-Chr1:26176493 Csa06g02998 Csa-Chr6:25857587 0 dispersed
Csa05g01054 Csa-Chr5:10498977 Csa06g02998 Csa-Chr6:25857587 0 dispersed
Csa06g02998 Csa-Chr6:25857587 Csa07g02348 Csa-Chr7:21727193 0 dispersed
Csa02g01383 Csa-Chr2:13262617 Csa06g02998 Csa-Chr6:25857587 0 transposed
Csa03g01651 Csa-Chr3:12329555 Csa06g02998 Csa-Chr6:25857587 0 transposed
Csa07g02314 Csa-Chr7:21479271 Csa06g02998 Csa-Chr6:25857587 0 transposed
Csa02g01905 Csa-Chr2:18004320 Csa06g02998 Csa-Chr6:25857587 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g02998 - - csv:101209691 1450.65