Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03285 | ATGGCCAAGCTTTTAAGCTTTGTTCTTGTTCTTTCCCTTCTTGCCTTTGCTCCACTCTGTTTGTGTAGCAGAAATAATGGTGGCTTTGGCTCTCTATACCCACAATATTATGACCGTTCCTGCCCCAAAGCTAAAGAAATAGTAAAATCCATTGTGGCTAAGGCTTTTGCCAGAGAAGCTCGTATTGCTGCTTCTATCCTTAGACTTCACTTCCATGACTGTTTTGTTCAGGGATGTGATGCATCTCTACTTTTGGATAGTAGTGGAAACATTAGGAGCGAGAAGAATTCAAACCCGAATAAGAACTCGGCCAGAGGATTTGAGGTGATTGATGAGATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGTCTTTGGCTGCAAGAGATTCGACGTTCATTACGGGCGGACCATATTGGGAGGTTCCATTAGGAAGGAAGGACTCAAGAACAGCAAGTTTGAGTGGATCCAACAATAACATTCCCGCTCCAAACAATACTTTCCAAACCATTCTCAATAGATTCCAAAACCAAGGGCTTGACATTGTTGATCTTGTTGCCTTATCAGGAGGCCACACCATCGGAAATTCAAGGTGCACCAGCTTCAGGCAGAGGTTATACAACCAAAACGGCAACGGACAACCCGACAAAACCCTTCCTCAGTCGTTCGCGACGGACCTCCGTAGCCGTTGCCCGAGATCCGGCGGCGACAATAACCTCTTTTCCCTGGACTACAGCCCGACCAAATTCGACAACAGCTATTTTAAGAACCTGGTTGCTTTCAAAGGGCTTCTCAACTCCGACCAAGTTCTCCTCACCGGAAACGACGCGTCGGCCGCTTTGGTTAAGAAATATGCAGACGACAGCGAGGAGTTCTTCCAGCAATTCGCCAAATCTATGATCAAAATGAGTAATATTTCCCCATTGACGGGTTCAAGTGGAGAGATCAGAAAGACTTGCAGGAAGATCAACAATTAG | 999 | 45.55 | MAKLLSFVLVLSLLAFAPLCLCSRNNGGFGSLYPQYYDRSCPKAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGNIRSEKNSNPNKNSARGFEVIDEIKSALEKECPQTVSCADILSLAARDSTFITGGPYWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGGHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQSFATDLRSRCPRSGGDNNLFSLDYSPTKFDNSYFKNLVAFKGLLNSDQVLLTGNDASAALVKKYADDSEEFFQQFAKSMIKMSNISPLTGSSGEIRKTCRKINN* | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 27565675 | 27567365 | + | CsaV3_6G046710.1 | Csa06g03285 | 534912 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03285 | 332 | Pfam | Peroxidase | 48 | 295 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Haem peroxidase superfamily signature | 63 | 77 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Haem peroxidase superfamily signature | 125 | 142 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Haem peroxidase superfamily signature | 143 | 155 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Haem peroxidase superfamily signature | 191 | 206 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Haem peroxidase superfamily signature | 250 | 265 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | Gene3D | Peroxidase, domain 2 | 169 | 311 | - | - | |
Csa06g03285 | 332 | ProSiteProfiles | Plant heme peroxidase family profile. | 31 | 331 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PANTHER | PEROXIDASE 72-RELATED | 5 | 331 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 191 | 201 | IPR019793 | - | |
Csa06g03285 | 332 | CDD | secretory_peroxidase | 32 | 330 | IPR033905 | GO:0004601|GO:0042744 | |
Csa06g03285 | 332 | Gene3D | - | 36 | 331 | - | - | |
Csa06g03285 | 332 | PANTHER | PEROXIDASE | 5 | 331 | - | - | |
Csa06g03285 | 332 | ProSitePatterns | Peroxidases active site signature. | 63 | 74 | IPR019794 | GO:0004601 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 41 | 60 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 65 | 85 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 105 | 118 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 124 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 143 | 158 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 190 | 202 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 248 | 263 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 264 | 281 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | PRINTS | Plant peroxidase signature | 305 | 318 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa06g03285 | 332 | SUPERFAMILY | Heme-dependent peroxidases | 32 | 331 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03263 | Csa-Chr3:29846147 | Csa06g03285 | Csa-Chr6:27565675 | 2.49E-70 | dispersed | |
Csa03g04641 | Csa-Chr3:40327967 | Csa06g03285 | Csa-Chr6:27565675 | 6.20E-70 | dispersed | |
Csa06g01861 | Csa-Chr6:16783402 | Csa06g03285 | Csa-Chr6:27565675 | 2.89E-51 | dispersed | |
Csa06g03285 | Csa-Chr6:27565675 | Csa07g00473 | Csa-Chr7:3441475 | 1.57E-105 | dispersed | |
Csa01g02902 | Csa-Chr1:25468972 | Csa06g03285 | Csa-Chr6:27565675 | 1.35E-88 | transposed | |
Csa04g00461 | Csa-Chr4:2879585 | Csa06g03285 | Csa-Chr6:27565675 | 1.64E-80 | transposed | |
Csa05g02547 | Csa-Chr5:26900165 | Csa06g03285 | Csa-Chr6:27565675 | 3.83E-99 | transposed | |
Csa06g00217 | Csa-Chr6:1493533 | Csa06g03285 | Csa-Chr6:27565675 | 3.01E-114 | transposed | |
Csa04g00543 | Csa-Chr4:3606838 | Csa06g03285 | Csa-Chr6:27565675 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03285 | K00430 | - | csv:101204648 | 643.269 |