Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03288 | ATGGGAGTTTGGGTGTTTGTGTGTGTTATTTTAGGTTGGTTTTTGTTGAAGAAGAAGAAGAAGATTGTTGAGAACAAAGATGGAATTCCTAAAGGGAATTTGGGTTGGCCTTTCTTTGGTGAAACTCTTCAATTCATTTCTTCTGGCTATTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTATGGGAATGTGTTTAAAACCAACATTTTGGGGACACCCATAATAGTATCAACTGATTCAGAGGTGAATAAGGTTATCTTACAAAACCATGGGAATATATTTACCCCAGCTTACCCAAAATCAATAACAGAACTACTTGGTACATATTCAATTCTAAGAATGAAAGGAAATGTTCAAAGAAGACTTCATACAATCATTGGAGCCTTCCTTAGGTCTCCTCAACTCAAAGCCCAAATCACTAAAGATATTCAAAATACTGTTCAACTTAGACTTGCTAACTGGAATAACTCTCAATTGCATCTTCAAACTGAAGCCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGCGTGGGACCTGGTAAAGAATTGGAGACTTTAAAAAGGGAATTTGAGGAGTTTATTAAAGCTTTGATTTGTATACCTATTAAATTACCTGGAACTAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGTTGTTGAAAATTGTGGGGAAGATTGTGGAAGAAAGGAAATCGATGGTGGGGGAGAAGGGTGCACCGAGAGATGCGGTGGACGTGCTCTTACAGGATCACAACGAGAACCAAGGGCTACCCCTGGATTTCATCAGCAGTCACATCATAGAGCTGATGATCCCCGGGGAGGAAACGGTACCGACGGCCATGACTCTCGCCGTTAAATTTCTCAGTGATTGTCCCCGCGCTCTTGCCCAATTAAAGGAAGAGAATATGAAACTGAAGAAGGAGAAGGATGGATCTGGGGAGGAGTATACGTGGACAGATTACATGTCTTTGCAATTTACTCAAAATGTAATTAGTGAAACATTAAGAATGGCTAATATCGTCAATGGAGTTTGGAGAAAAGCTCAAAAAGACGTGAAAATCAAAGGATATTTAATACCGCAAGGATGGTGCGTCCTGGCATCCTTTATTTCAGTTCATATGGATGAAAAGAACTATGCAAACCCACATGAGTTTGATCCGTGGAGATGGGAGGTACAATAA | 1203 | 39.98 | MGVWVFVCVILGWFLLKKKKKIVENKDGIPKGNLGWPFFGETLQFISSGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSEVNKVILQNHGNIFTPAYPKSITELLGTYSILRMKGNVQRRLHTIIGAFLRSPQLKAQITKDIQNTVQLRLANWNNSQLHLQTEAKQITFEVLVKVLMSVGPGKELETLKREFEEFIKALICIPIKLPGTRLYKSLKAREKLLKIVGKIVEERKSMVGEKGAPRDAVDVLLQDHNENQGLPLDFISSHIIELMIPGEETVPTAMTLAVKFLSDCPRALAQLKEENMKLKKEKDGSGEEYTWTDYMSLQFTQNVISETLRMANIVNGVWRKAQKDVKIKGYLIPQGWCVLASFISVHMDEKNYANPHEFDPWRWEVQ* | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 27579040 | 27586995 | + | CsaV3_6G046740.1 | Csa06g03288 | 534915 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03288 | 400 | SUPERFAMILY | Cytochrome P450 | 29 | 398 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | Pfam | Cytochrome P450 | 30 | 398 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | PANTHER | CYTOCHROME P450 26 | 7 | 398 | - | - | |
Csa06g03288 | 400 | Gene3D | Cytochrome P450 | 18 | 400 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | PANTHER | 3-EPI-6-DEOXOCATHASTERONE 23-MONOOXYGENASE CYP90C1 | 7 | 398 | - | - | |
Csa06g03288 | 400 | PRINTS | E-class P450 group IV signature | 331 | 347 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | PRINTS | E-class P450 group IV signature | 56 | 79 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | PRINTS | E-class P450 group IV signature | 380 | 398 | IPR002403 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03288 | 400 | Coils | Coil | 302 | 322 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g04086 | Csa-Chr3:35819170 | Csa06g03288 | Csa-Chr6:27579040 | 6.50E-141 | dispersed | |
Csa06g03288 | Csa-Chr6:27579040 | Csa05g03046 | Csa-Chr5:30611740 | 1.84E-76 | dispersed | |
Csa06g03288 | Csa-Chr6:27579040 | Csa07g02396 | Csa-Chr7:22043310 | 8.44E-155 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03288 | K12637 | - | csv:101203911 | 787.334 |