Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g03357 ATGGCCTCCTTTGCTGTGCTATTCTCACACTTTGCAGTTCTTTTGCTGTCTGTTTTGTCCTTGGGAAGTTCATTGAGCTTAGACTACTACGAGAAGACATGCCCTGGTGCCGACTTCATCGTTACTAAAGCTGTCAGGGCTGCAGCTTATAAAGACAAGACTGTTCCTGCTGCACTTCTCCGGATGCACTTTCATGACTGCTTTATTAGGGGTTGTGATGCATCCATACTGCTGAATTCAGTAGGGAACAACGTGGCAGAGAAAGATGGGCCACCTAATTTGTCTTTGCATTCGTTTTTTGTGATTGACAATGCGAAGAAAGAACTGGAATCTTATTGTCCTGGTGTTGTCTCTTGTGCTGATATCTTGGCTCTGGCTGCAAGAGATGCAGTTGTGCTTTCTGGAGGTCCAACATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGGATATCAAAGGCTAGTGAAACAATACAATTGCCATCTCCAAGCTTCAACATATCTCAGCTGCAACAGAGCTTCTCACAAAGGGGATTATCCCTGGACGACTTAGTAGCTCTTTCAGGGGGACACACCTTAGGATTTGCCCATTGCTCATCCTTCCAAGGTAGAATCCGCAACTTCAGTCCGGCCAGCAACGTTGACCCTGAAATGAACCCATCCTTTGCAGCAAGTCTACGAAACATGTGCCCAGTAAACAACAACGCAAAAAATGCTGGGTCTAACATGGATACTTCTCCAACCACATTTGACAACAATTACTACAGATTGATACTCCAAAAGAAGGGACTGTTTTCTTCTGATCAAGCTCTGCTCAAATTTCCTAAGACCAACAATCTTCTTTATAAGTTCGCAAGCTCAAAGGAAGCTTTTAACCGTGCATTTGTTAATTCTATGATCAAGATGAGTAGCATCACTGGAGGTCAGGAGATCAGGAAGAATTGTAGGGCAGTGAACTAA 957 43.99 MASFAVLFSHFAVLLLSVLSLGSSLSLDYYEKTCPGADFIVTKAVRAAAYKDKTVPAALLRMHFHDCFIRGCDASILLNSVGNNVAEKDGPPNLSLHSFFVIDNAKKELESYCPGVVSCADILALAARDAVVLSGGPTWDVPKGRKDGRISKASETIQLPSPSFNISQLQQSFSQRGLSLDDLVALSGGHTLGFAHCSSFQGRIRNFSPASNVDPEMNPSFAASLRNMCPVNNNAKNAGSNMDTSPTTFDNNYYRLILQKKGLFSSDQALLKFPKTNNLLYKFASSKEAFNRAFVNSMIKMSSITGGQEIRKNCRAVN* 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27981854 27984623 - CsaV3_6G047430.1 Csa06g03357 534984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g03357 318 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601|GO:0042744
Csa06g03357 318 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 Gene3D Peroxidase, domain 2 160 301 - -
Csa06g03357 318 SUPERFAMILY Heme-dependent peroxidases 25 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 Gene3D - 28 318 - -
Csa06g03357 318 Pfam Peroxidase 42 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 ProSiteProfiles Plant heme peroxidase family profile. 24 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa06g03357 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Csa06g03357 318 PANTHER PEROXIDASE 10 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01714 Csa-Chr2:16871896 Csa06g03357 Csa-Chr6:27981854 5.39E-156 dispersed
Csa03g01667 Csa-Chr3:12492194 Csa06g03357 Csa-Chr6:27981854 6.53E-117 dispersed
Csa04g01970 Csa-Chr4:19698399 Csa06g03357 Csa-Chr6:27981854 3.52E-89 dispersed
Csa06g03357 Csa-Chr6:27981854 Csa07g01949 Csa-Chr7:19226799 2.33E-89 dispersed
Csa06g03357 Csa-Chr6:27981854 Csa07g00375 Csa-Chr7:2787973 8.07E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g03357 K00430 - csv:101217954 599.742