Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03530 | ATGGAGTTAAAGGACGCCATTCTTCTTCTCTTTGCCTTCCTCTTCTTCTCCTTATGGTGGCGCTACTGGTCTGCTACCGGGGGCGGATCGAAGAATCTTCCACCTGGTCCACCTGGCTGGCCGATCGTCGGAAACCTCATCCAAGTTATCCTCCAGCGTCGTCCATTCATCTTCGTAGCACGCGATTTACGTGAAAAATATGGTCCCATTTTCACCATGCAAATGGGACAACGCACACTCATCATTGTGTCAAGTGCCGAACTCATTCACGAAGCTCTTGTGCAACGTGGACCCTTATTCGCCAGCCGCCCTGCAGACTCTCCCATCCGCCTTGTCTTTAGCGTCGGCAAATGCGCTGTCAACTCTGCCGAATACGGCCCTCTCTGGCGAACCCTCCGCCGCAACTTCGTTACGGAGTTAATCAATCCTACCAGAATCAAGCAGTGTAGCTGGATACGGAAGTGGGCCATAGAAAGCCATCTGGAAAGACTAAGAAAAGAGAATTCAGAGAAAGGATTCGTTGAGGTTATGAGTAACTGCCGGCTTTCAGTCTGTAGTATTCTCATCTGCATATGCTTTGGAGCCAAAATCCCGGAAGAAGAGATTAAAGTCATAGAGAGTATACTGAAGGATGTGATGTTGATTACATTGCCAAAGCTTCCGGACTTCTTGCCGATTCTGACGCCGTTGTTTGGGCGGCAGTTGAAGCAAGCGAAAGAGCTGAGGAGAAAACAGTTGGAGTGTTTGATTCCGTTGATAAGGAAGAGAAGGATGTTTATGGAGAGGAATGGGGATGAGAGTGTGAGGAAGGAGTTGCCGGAGATGGTTAGTCCGATGGGGGCGGCGTATCTTGATTCGCTTTTCGAACTGGAAACGCCGGGACGAGGGAGGTTGGGAGAGGAGGAACTGGTGACGCTTTGTTCGGAAGTTATTAATGCTGGAACTGACACGAGCGCGACGGCGTTGGAGTGGGCTTTGCTTCATTTGGTACAAGATCAAGACGTTCAGGAAAGACTATACAATGAAATTATTAACGTTGTTGGTAAAGATGGGCTAATTACCGAAGGGGACATAGAGAAAATGCCATATCTCGGGGCGGTGGTAAAAGAGACTTTCCGTCGTCACCCACCAAGTCATTTCTTACTATCTCACGCGGCAACCAAAGAAACCGAGCTCGGCGGCTACACAATCCCGGCGGATGCCAGCGTGGAGTTTTACACAGCCCACTTGACAGAAGACCCGAACACATGGGAAGAACCGGGTTCATTCCGACCGGACAGGTTCTTGGAAGGCGACGGCGTTGGCGTGGACGTCACAGGGACTAAGGCCGTCAAGATGGTACCGTTCGGGGCAGGGCGGCGAATCTGCCCGGCCATGACTTTGGGCACGTTGCATGTTCACATGATGCTGGCCAAAATGGTACACGCGTTCAAGTGGGTCCCGGTTCCCGGAGCCCCGCCGGACCCGACCGAGACATTTGCCTTTACCGTGATTATGAAGAATCCTCTGAAGGCTATCGTATTGGACCGGACTCGTTTATGA | 1542 | 51.23 | MELKDAILLLFAFLFFSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPTRIKQCSWIRKWAIESHLERLRKENSEKGFVEVMSNCRLSVCSILICICFGAKIPEEEIKVIESILKDVMLITLPKLPDFLPILTPLFGRQLKQAKELRRKQLECLIPLIRKRRMFMERNGDESVRKELPEMVSPMGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQDQDVQERLYNEIINVVGKDGLITEGDIEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLTEDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKAVKMVPFGAGRRICPAMTLGTLHVHMMLAKMVHAFKWVPVPGAPPDPTETFAFTVIMKNPLKAIVLDRTRL* | 514 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 28747373 | 28750307 | - | CsaV3_6G049160.1 | Csa06g03530 | 535157 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03530 | 513 | Gene3D | Cytochrome P450 | 25 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 449 | 458 | IPR017972 | GO:0005506|GO:0016705 | |
Csa06g03530 | 513 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | P450 superfamily signature | 447 | 456 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 4 | 508 | - | - | |
Csa06g03530 | 513 | Pfam | Cytochrome P450 | 34 | 502 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | SUPERFAMILY | Cytochrome P450 | 34 | 510 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 446 | 456 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PRINTS | E-class P450 group I signature | 456 | 479 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
Csa06g03530 | 513 | PANTHER | CYTOCHROME P450 LIKE PROTEIN | 4 | 508 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g00409 | Csa-Chr6:3567044 | Csa06g03530 | Csa-Chr6:28747373 | 4.54E-159 | dispersed | |
Csa06g03530 | Csa-Chr6:28747373 | Csa02g02817 | Csa-Chr2:24509116 | 1.33E-119 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03530 | K21995 | - | csv:101216852 | 1024.62 |