Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g03738 ATGGAGAAATCGAGTTTCTTATGCCATTGCCGTCTCCTCCTCCTCCTCCTCCTCCTCCTTATCGGCCTTTTCATTCAACAAGCAGCCTCTTCTTCCAACAATCAAAAAAAGGCTTACATTGTTTACTTTGGGGAGCACCATGGAGAAAAGAGTATAGAAGAGATAAAAGAAAGACACCATTCATATTTGATGTATGTAAAAGAGAGCGAAGAAGATGCAAAATCTTGTCTTCTTTACAATTACAAACATTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAGCAAGCCTCCAAACTTTCAGACTTGGATGAAGTGGTGAGTGTGATAGAGAGTAAAAAGTATAGGATGGAGACAACAAGGTCATGGGAGTTCTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATTGGAATGCTCGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTCAGTGATAAAGGGATGGGACCCATTCCAAAATCATGGAAAGGAATCTGCCAAACAGGACCTGCCTTCCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTCGGCCGTTTAAATAAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCATGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAACGTGTCGGCCTTTGGTGGCGTTGCTTGGGGCACGGCCTCCGGCGGTGCCCCATGGGCCCGCCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTTTAGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATCGCCGATGGTGTCGACGTTCTCAGCTTGTCTATTGGAAAATCGGAACCGTACAATTACACGGATGACGGAATGGCTATAGGAGCTCTGCACGCGGTTAAAAAAGACATTGTTGTGTCTTGTAGTGCTGGGAATTATGGACCTACGCCGTCGGCGTTGTCTAATGTCGCGCCGTGGATTATCACTGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGGTTGAAGATTAAGGGATTGTCAGTGGCTCCATCGAAGTTGGAGAGGAAGAAGATGTATCCATTAGTGTATGCTGGAGATATAATGAACCCTCATGCACCTCGAAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACATGAGAAAGCCAAAGGAAAAATAGTGTTATGCTTTAGAGGTGAAGGAATCAGCCGATTCGCAGGCAGCCTCGAAGTTCAAAGATCGGGTGGCGCCGGAATGATACTCGGAAACGTGCCAGCGGTAGGACGAAGGCCCCACGCCGATCCCCATTTTGTTCCCGCCACCGCCGTGTCTTACGAAGATGCAAATATAATCCTCAAATATATAAAATCTCGCAAAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCCGCGCCGGCCATGGCCAACTTCTCAAGTCGAGGTCCAAACCCTATCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGAGTGGACATATTAGCAGCATGGTCCGAACAAGATTCCCCAACTAAACTCCCTAAATACTTAGACCCTCGTATCGTCCAATACAATCTCTACTCCGGCACTTCCATGTCTTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGTGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCTCCACCACCAACAATAAATACGGCCAACCCATCACCGACGACTCCACCCTCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGTCCCTCCAAGGCTGCCGACCCCGGCCTCGTCTACGACTCCAATTACACCGATTACCTCCATTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCAAGTGCCCTCCACGTGCTCTCCATCCCCATGACCTGAATTACCCTTCCATTGCCGTCCCTCAACTCAGAAACGTCGTGAGGATCAAAAGGACGGTTACTAATGTGGGCGGCGGAGGTAAAAATGTATACTTTTTTAAGAGCGAAGCGCCGCGGGGTGTGGCGGTGAGTGCTTCTCCAAATATATTGTATTTCAATAGAGTTGGGGAGAGGAAAAAATTTACAATTACTATTAGTAGAAAAGTAAATAATAACAATAGAAGTAGTAAAAAAGGCGAAGATTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCTACTTAA 2376 48.53 MEKSSFLCHCRLLLLLLLLLIGLFIQQAASSSNNQKKAYIVYFGEHHGEKSIEEIKERHHSYLMYVKESEEDAKSCLLYNYKHSINAFAAILTPQQASKLSDLDEVVSVIESKKYRMETTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNKTADYRSPCDKDGHGSHTASIAGGRRVYNVSAFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGMAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLERKKMYPLVYAGDIMNPHAPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRFAGSLEVQRSGGAGMILGNVPAVGRRPHADPHFVPATAVSYEDANIILKYIKSRKNPTATIVPPVTIYGSRPAPAMANFSSRGPNPIDPHFLKPDITAPGVDILAAWSEQDSPTKLPKYLDPRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTSTTNNKYGQPITDDSTLDNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFKCPPRALHPHDLNYPSIAVPQLRNVVRIKRTVTNVGGGGKNVYFFKSEAPRGVAVSASPNILYFNRVGERKKFTITISRKVNNNNRSSKKGEDYSFGWFAWSDGIHYVRSPIAVSST* 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29827158 29832746 + CsaV3_6G051240.1 Csa06g03738 535365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g03738 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 573 583 IPR023828 -
Csa06g03738 791 Pfam Fibronectin type-III domain 685 788 IPR041469 -
Csa06g03738 791 ProSiteProfiles Serine proteases, subtilase domain profile. 122 645 - -
Csa06g03738 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 788 IPR045051 -
Csa06g03738 791 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Csa06g03738 791 PRINTS Subtilisin serine protease family (S8) signature 223 236 IPR015500 -
Csa06g03738 791 PRINTS Subtilisin serine protease family (S8) signature 572 588 IPR015500 -
Csa06g03738 791 SUPERFAMILY Subtilisin-like 138 649 IPR036852 GO:0004252|GO:0006508
Csa06g03738 791 Gene3D Peptidase S8/S53 domain 147 658 IPR036852 GO:0004252|GO:0006508
Csa06g03738 791 Pfam Subtilase family 145 619 IPR000209 GO:0006508|GO:0008236
Csa06g03738 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 117 IPR037045 -
Csa06g03738 791 Gene3D - 364 509 - -
Csa06g03738 791 CDD Peptidases_S8_3 115 609 IPR034197 -
Csa06g03738 791 Pfam Peptidase inhibitor I9 39 117 IPR010259 -
Csa06g03738 791 Gene3D - 662 791 - -
Csa06g03738 791 Pfam PA domain 395 487 IPR003137 -
Csa06g03738 791 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 30 788 - -
Csa06g03738 791 CDD PA_subtilisin_like 371 502 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00590 Csa-Chr4:3888813 Csa06g03738 Csa-Chr6:29827158 3.76E-166 dispersed
Csa06g03738 Csa-Chr6:29827158 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa06g03883 Csa-Chr6:30695745 Csa06g03738 Csa-Chr6:29827158 6.76E-105 dispersed
Csa06g03738 Csa-Chr6:29827158 Csa07g02348 Csa-Chr7:21727193 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g03738 - - csv:101217410 1578.92