Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03738 | ATGGAGAAATCGAGTTTCTTATGCCATTGCCGTCTCCTCCTCCTCCTCCTCCTCCTCCTTATCGGCCTTTTCATTCAACAAGCAGCCTCTTCTTCCAACAATCAAAAAAAGGCTTACATTGTTTACTTTGGGGAGCACCATGGAGAAAAGAGTATAGAAGAGATAAAAGAAAGACACCATTCATATTTGATGTATGTAAAAGAGAGCGAAGAAGATGCAAAATCTTGTCTTCTTTACAATTACAAACATTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAGCAAGCCTCCAAACTTTCAGACTTGGATGAAGTGGTGAGTGTGATAGAGAGTAAAAAGTATAGGATGGAGACAACAAGGTCATGGGAGTTCTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATTGGAATGCTCGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTCAGTGATAAAGGGATGGGACCCATTCCAAAATCATGGAAAGGAATCTGCCAAACAGGACCTGCCTTCCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTCGGCCGTTTAAATAAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCATGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAACGTGTCGGCCTTTGGTGGCGTTGCTTGGGGCACGGCCTCCGGCGGTGCCCCATGGGCCCGCCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTTTAGGAAACGTTTGTTTCGACACCGACATGTTGGCTGCCATGGACGACGCCATCGCCGATGGTGTCGACGTTCTCAGCTTGTCTATTGGAAAATCGGAACCGTACAATTACACGGATGACGGAATGGCTATAGGAGCTCTGCACGCGGTTAAAAAAGACATTGTTGTGTCTTGTAGTGCTGGGAATTATGGACCTACGCCGTCGGCGTTGTCTAATGTCGCGCCGTGGATTATCACTGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGGTTGAAGATTAAGGGATTGTCAGTGGCTCCATCGAAGTTGGAGAGGAAGAAGATGTATCCATTAGTGTATGCTGGAGATATAATGAACCCTCATGCACCTCGAAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACATGAGAAAGCCAAAGGAAAAATAGTGTTATGCTTTAGAGGTGAAGGAATCAGCCGATTCGCAGGCAGCCTCGAAGTTCAAAGATCGGGTGGCGCCGGAATGATACTCGGAAACGTGCCAGCGGTAGGACGAAGGCCCCACGCCGATCCCCATTTTGTTCCCGCCACCGCCGTGTCTTACGAAGATGCAAATATAATCCTCAAATATATAAAATCTCGCAAAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCCGCGCCGGCCATGGCCAACTTCTCAAGTCGAGGTCCAAACCCTATCGACCCTCATTTTCTTAAGCCGGACATAACAGCTCCGGGAGTGGACATATTAGCAGCATGGTCCGAACAAGATTCCCCAACTAAACTCCCTAAATACTTAGACCCTCGTATCGTCCAATACAATCTCTACTCCGGCACTTCCATGTCTTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGTGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCTCCACCACCAACAATAAATACGGCCAACCCATCACCGACGACTCCACCCTCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGTCCCTCCAAGGCTGCCGACCCCGGCCTCGTCTACGACTCCAATTACACCGATTACCTCCATTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCAAGTGCCCTCCACGTGCTCTCCATCCCCATGACCTGAATTACCCTTCCATTGCCGTCCCTCAACTCAGAAACGTCGTGAGGATCAAAAGGACGGTTACTAATGTGGGCGGCGGAGGTAAAAATGTATACTTTTTTAAGAGCGAAGCGCCGCGGGGTGTGGCGGTGAGTGCTTCTCCAAATATATTGTATTTCAATAGAGTTGGGGAGAGGAAAAAATTTACAATTACTATTAGTAGAAAAGTAAATAATAACAATAGAAGTAGTAAAAAAGGCGAAGATTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGATTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCTACTTAA | 2376 | 48.53 | MEKSSFLCHCRLLLLLLLLLIGLFIQQAASSSNNQKKAYIVYFGEHHGEKSIEEIKERHHSYLMYVKESEEDAKSCLLYNYKHSINAFAAILTPQQASKLSDLDEVVSVIESKKYRMETTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNKTADYRSPCDKDGHGSHTASIAGGRRVYNVSAFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGMAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLERKKMYPLVYAGDIMNPHAPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRFAGSLEVQRSGGAGMILGNVPAVGRRPHADPHFVPATAVSYEDANIILKYIKSRKNPTATIVPPVTIYGSRPAPAMANFSSRGPNPIDPHFLKPDITAPGVDILAAWSEQDSPTKLPKYLDPRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTSTTNNKYGQPITDDSTLDNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFKCPPRALHPHDLNYPSIAVPQLRNVVRIKRTVTNVGGGGKNVYFFKSEAPRGVAVSASPNILYFNRVGERKKFTITISRKVNNNNRSSKKGEDYSFGWFAWSDGIHYVRSPIAVSST* | 792 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29827158 | 29832746 | + | CsaV3_6G051240.1 | Csa06g03738 | 535365 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03738 | 791 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 573 | 583 | IPR023828 | - | |
Csa06g03738 | 791 | Pfam | Fibronectin type-III domain | 685 | 788 | IPR041469 | - | |
Csa06g03738 | 791 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 122 | 645 | - | - | |
Csa06g03738 | 791 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 30 | 788 | IPR045051 | - | |
Csa06g03738 | 791 | PRINTS | Subtilisin serine protease family (S8) signature | 145 | 164 | IPR015500 | - | |
Csa06g03738 | 791 | PRINTS | Subtilisin serine protease family (S8) signature | 223 | 236 | IPR015500 | - | |
Csa06g03738 | 791 | PRINTS | Subtilisin serine protease family (S8) signature | 572 | 588 | IPR015500 | - | |
Csa06g03738 | 791 | SUPERFAMILY | Subtilisin-like | 138 | 649 | IPR036852 | GO:0004252|GO:0006508 | |
Csa06g03738 | 791 | Gene3D | Peptidase S8/S53 domain | 147 | 658 | IPR036852 | GO:0004252|GO:0006508 | |
Csa06g03738 | 791 | Pfam | Subtilase family | 145 | 619 | IPR000209 | GO:0006508|GO:0008236 | |
Csa06g03738 | 791 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 24 | 117 | IPR037045 | - | |
Csa06g03738 | 791 | Gene3D | - | 364 | 509 | - | - | |
Csa06g03738 | 791 | CDD | Peptidases_S8_3 | 115 | 609 | IPR034197 | - | |
Csa06g03738 | 791 | Pfam | Peptidase inhibitor I9 | 39 | 117 | IPR010259 | - | |
Csa06g03738 | 791 | Gene3D | - | 662 | 791 | - | - | |
Csa06g03738 | 791 | Pfam | PA domain | 395 | 487 | IPR003137 | - | |
Csa06g03738 | 791 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.6 | 30 | 788 | - | - | |
Csa06g03738 | 791 | CDD | PA_subtilisin_like | 371 | 502 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g00590 | Csa-Chr4:3888813 | Csa06g03738 | Csa-Chr6:29827158 | 3.76E-166 | dispersed | |
Csa06g03738 | Csa-Chr6:29827158 | Csa07g00232 | Csa-Chr7:1828536 | 0 | dispersed | |
Csa06g03883 | Csa-Chr6:30695745 | Csa06g03738 | Csa-Chr6:29827158 | 6.76E-105 | dispersed | |
Csa06g03738 | Csa-Chr6:29827158 | Csa07g02348 | Csa-Chr7:21727193 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03738 | - | - | csv:101217410 | 1578.92 |