Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g03766 ATGGCTGCTTCTACAATGGCTCTCTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTTTCCCCCAATGCCCCTGAAATTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCTTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCACCATCCTACCTTACCGGAGAGTTCCCTGGTGACTACGGTTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTTTTCCCTGAGCTTTTGTCTCGTAATGGTGTGAAGTTTGGTGAAGCTGTGTGGTTCAAGGCTGGTTCGCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCACGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAAGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGTGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTCGACCCATTGGGTTTGGCTGATGACCCAGAGGCATTCGCTGAGTTGAAGGTTAAGGAGCTCAAGAATGGAAGGTTAGCTATGTTCTCCATGTTTGGATTCTTTGTTCAGGCTATCGTTACCGGAAAGGGTCCATTGGAGAATTTGGCTGATCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCCTATGCTACAAACTTTGTTCCTGGAAAGTGA 798 53.13 MAASTMALSSPTLAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29983572 29985221 - CsaV3_6G051520.1 Csa06g03766 535393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g03766 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 265 - -
Csa06g03766 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Csa06g03766 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Csa06g03766 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Csa06g03766 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02243 Csa-Chr1:19549853 Csa06g03766 Csa-Chr6:29983572 0 dispersed
Csa06g03766 Csa-Chr6:29983572 Csa07g00262 Csa-Chr7:2041428 6.13E-154 dispersed
Csa06g03766 Csa-Chr6:29983572 Csa06g03767 Csa-Chr6:29986415 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g03766 K08912 - csv:101221671 544.658