Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03767 | ATGGCTGCCTCTGCAATGGCTCTTTCCTCCCCAACTCTGGCCGGCCAAGCCGTGAAACTCTCCCCCACTGCCCCTGAAATTCAGGGCAATGCAAAATTCACCATGAGGAAGACTGCCAGCAAGTCAGTTTCCTCCGGCAGCCCGTGGTATGGTCCTGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCACCATCCTACCTTACCGGAGAGTTCCCTGGTGACTACGGTTGGGACACTGCTGGACTTTCAGCTGATCCCGAGACCTTCGCCAAGAACCGTGAGTTGGAAGTGATCCACTCCAGATGGGCCATGCTTGGAGCTTTGGGGTGTGTCTTCCCTGAGCTTTTGTCTCGCAATGGTGTGAAGTTTGGTGAGGCTGTTTGGTTCAAGGCTGGATCTCAGATCTTCAGCGAGGGCGGGCTTGACTACTTGGGCAACCCCAGCTTGGTCCATGCTCAGAGCATTTTGGCCATCTGGGCTTGCCAGGTTGTGTTGATGGGTGCCGTCGAGGGTTACCGTATTGCTGGCGGCCCACTCGGAGAGGTGACTGACCCCATCTACCCAGGTGGAAGCTTTGACCCATTGGGTTTGGCTGATGACCCAGAGGCCTTCGCTGAATTGAAGGTTAAGGAGTTGAAGAATGGAAGGTTGGCAATGTTTTCCATGTTTGGATTCTTCGTTCAAGCCATTGTTACTGGAAAGGGTCCTTTGGAAAACTTGGCTGACCACCTTGCTGACCCAGTCAACAACAATGCTTGGGCATATGCCACAAACTTTGTTCCCGGAAAGTGA | 798 | 53.76 | MAASAMALSSPTLAGQAVKLSPTAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 29986415 | 29987212 | + | CsaV3_6G051530.1 | Csa06g03767 | 535394 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03767 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Csa06g03767 | 265 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC | 1 | 265 | - | - | |
Csa06g03767 | 265 | Pfam | Chlorophyll A-B binding protein | 65 | 231 | IPR022796 | - | |
Csa06g03767 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - | |
Csa06g03767 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 265 | IPR001344 | GO:0009765|GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g02852 | Csa-Chr3:27304318 | Csa06g03767 | Csa-Chr6:29986415 | 2.09E-171 | dispersed | |
Csa06g01182 | Csa-Chr6:9988814 | Csa06g03767 | Csa-Chr6:29986415 | 0 | dispersed | |
Csa06g03767 | Csa-Chr6:29986415 | Csa07g00262 | Csa-Chr7:2041428 | 1.26E-153 | dispersed | |
Csa06g03766 | Csa-Chr6:29983572 | Csa06g03767 | Csa-Chr6:29986415 | 0 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03767 | K08912 | - | csv:101222687 | 543.888 |