Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa06g03874 | ATGGTCGGAGGTTTTGAAGTGGGAGCTGTCCCCTACAACCCTGATGGTTGGGGTCCTCCGGACTCTACCGCCACTCTCGTCGCCTCCTCTAACCTCCCTCTCAATGTCCCTTTTGCCCCATTTTCTCGCTCCGATAAGCTTGGCCGGATTGCCGATTGGACTCGAACCATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTTGATTTCACCAATGACGATTCCTTTCCTGCCAATGCCGATGAGGACATGTCCTTTCGTTTGGTTGATGGAAAGCCTCCTCCGCGCCCTAAGTTTGGCCCTAAATGGCGATTCAATCAACAAAGGACGCAACTACCTCAGCGCCGCGACGAAGAAGTTGAAGCTCGTAAGCGTGAGGCCGAGAAGGAGCGGGCTCGCCGTGACCGCCTTTACAACCTCAACAGGTCTAATGTCAATGCCCCTCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCTGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCAAAGCTGTCCTTCTCTGTTCCCGAGCCCGAAGACCTTCTTCTCTGCGGCGGCTTAGAGTTCTATGATCGAGCATACGACCGAATCACTCCCAAGAACGAACGCCGCCTCGAACGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGACGATCCTGTCATTCGTCGTTTAGCAAACGAGGACAAAGCCACAGTTTTTGCCACCGATGCCATCCTTTCTACACTTATGTGCGCAACGAGATCGGTCTACTCCTGGGATATTGTGGTTCAGCGTGTTGGTAACAAGCTTTTCTTTGATAAGAGAGATGGGTCACAACTTGATTTGCTTGCCGTCCACGAGACCTCTCAGGAACCCTTACCAGAGGCGAAGGATGATATCAATTCTGCTTACTCACTCAGTGTTGAAGCTGCTTACATTAATCAGAACTTTTCACAGCAAGTTTTAGTTAGGGATGGAAATAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAACTCGATGATGATATGTATCTTGTAGCCAGGTGTGAGGTTCAAAGTGTAATGGAGGTTAATAAGCAAAGATCGTTCTTGACTTTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCTACTGAGTTGAAGAACAATGCTAATAAATTAGCAAAATGGACAGCTCAAGCCCTGTTGGCTAGTGCAGATATGATGAAATTGGGATACGTCTCTAGGGTTCATCCTCGTGATCACTTTAACCATGTCATCTTAGCTGTGGTTGGATACAAACCTAAGGATTTTGCAGGTCAAATTAACTTGAATACTTCTAACATGTGGGGTATTGTTAAATCAATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGATCCATCGAAACCTCAAGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGCAGAAGATGAAAATGGTGTCACTCCTAATGCGGCGACGGATGATGCAGAAGAGAAGGTTGATGCTGTTCAAGCTTAG | 1701 | 46.8 | MVGGFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPAEDENGVTPNAATDDAEEKVDAVQA* | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 30634022 | 30635722 | + | CsaV3_6G052600.1 | Csa06g03874 | 535501 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa06g03874 | 566 | Pfam | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) | 6 | 517 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Csa06g03874 | 566 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D | 4 | 559 | - | - | |
Csa06g03874 | 566 | PIRSF | Transl_init_eIF3d | 1 | 547 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Csa06g03874 | 566 | Coils | Coil | 118 | 138 | - | - | |
Csa06g03874 | 566 | MobiDBLite | consensus disorder prediction | 530 | 566 | - | - | |
Csa06g03874 | 566 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
Csa06g03874 | 566 | Hamap | Eukaryotic translation initiation factor 3 subunit D [EIF3D]. | 3 | 529 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 | |
Csa06g03874 | 566 | MobiDBLite | consensus disorder prediction | 88 | 134 | - | - | |
Csa06g03874 | 566 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 | 4 | 559 | IPR007783 | GO:0003743|GO:0005737|GO:0005852 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa06g03874 | K03251 | - | csv:101208923 | 1112.44 |