Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g03874 ATGGTCGGAGGTTTTGAAGTGGGAGCTGTCCCCTACAACCCTGATGGTTGGGGTCCTCCGGACTCTACCGCCACTCTCGTCGCCTCCTCTAACCTCCCTCTCAATGTCCCTTTTGCCCCATTTTCTCGCTCCGATAAGCTTGGCCGGATTGCCGATTGGACTCGAACCATGAATAACCCTGGTCGCCCCAAGACTGCTTCCGATTCCGTCTTTGATTTCACCAATGACGATTCCTTTCCTGCCAATGCCGATGAGGACATGTCCTTTCGTTTGGTTGATGGAAAGCCTCCTCCGCGCCCTAAGTTTGGCCCTAAATGGCGATTCAATCAACAAAGGACGCAACTACCTCAGCGCCGCGACGAAGAAGTTGAAGCTCGTAAGCGTGAGGCCGAGAAGGAGCGGGCTCGCCGTGACCGCCTTTACAACCTCAACAGGTCTAATGTCAATGCCCCTCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCTGAATGGAACATGCTTGATCAGATTCCCTTCTCCACTTTCTCAAAGCTGTCCTTCTCTGTTCCCGAGCCCGAAGACCTTCTTCTCTGCGGCGGCTTAGAGTTCTATGATCGAGCATACGACCGAATCACTCCCAAGAACGAACGCCGCCTCGAACGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGACGATCCTGTCATTCGTCGTTTAGCAAACGAGGACAAAGCCACAGTTTTTGCCACCGATGCCATCCTTTCTACACTTATGTGCGCAACGAGATCGGTCTACTCCTGGGATATTGTGGTTCAGCGTGTTGGTAACAAGCTTTTCTTTGATAAGAGAGATGGGTCACAACTTGATTTGCTTGCCGTCCACGAGACCTCTCAGGAACCCTTACCAGAGGCGAAGGATGATATCAATTCTGCTTACTCACTCAGTGTTGAAGCTGCTTACATTAATCAGAACTTTTCACAGCAAGTTTTAGTTAGGGATGGAAATAAGGTGGCCTTTGACGAGCCAAACCCATTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTTGCTTATAGGTATAGGAGGTGGAAACTCGATGATGATATGTATCTTGTAGCCAGGTGTGAGGTTCAAAGTGTAATGGAGGTTAATAAGCAAAGATCGTTCTTGACTTTGAATGCTCTTAATGAATTTGATCCCAAATATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCTACTGAGTTGAAGAACAATGCTAATAAATTAGCAAAATGGACAGCTCAAGCCCTGTTGGCTAGTGCAGATATGATGAAATTGGGATACGTCTCTAGGGTTCATCCTCGTGATCACTTTAACCATGTCATCTTAGCTGTGGTTGGATACAAACCTAAGGATTTTGCAGGTCAAATTAACTTGAATACTTCTAACATGTGGGGTATTGTTAAATCAATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGATCCATCGAAACCTCAAGTTAGGATCTATGAGGTTCCTGCAGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGATCAAGTGCAACCACCAGCAGAAGATGAAAATGGTGTCACTCCTAATGCGGCGACGGATGATGCAGAAGAGAAGGTTGATGCTGTTCAAGCTTAG 1701 46.8 MVGGFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPAEDENGVTPNAATDDAEEKVDAVQA* 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30634022 30635722 + CsaV3_6G052600.1 Csa06g03874 535501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g03874 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 6 517 IPR007783 GO:0003743|GO:0005737|GO:0005852
Csa06g03874 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 4 559 - -
Csa06g03874 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743|GO:0005737|GO:0005852
Csa06g03874 566 Coils Coil 118 138 - -
Csa06g03874 566 MobiDBLite consensus disorder prediction 530 566 - -
Csa06g03874 566 MobiDBLite consensus disorder prediction 114 134 - -
Csa06g03874 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743|GO:0005737|GO:0005852
Csa06g03874 566 MobiDBLite consensus disorder prediction 88 134 - -
Csa06g03874 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 559 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g03874 K03251 - csv:101208923 1112.44