Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa06g03883 ATGGATATTATTCACTGTACACGTCTACTATGTGTTGTTGTCTGTTTTGGGGTGTTTGTATGCGCATCTTGTCTGGATGAATTCGGTGATTCAACAGCTGTTTACATTGTAACTCTCAAGGAACCTCCTTCTACTACTCATTATTATGGTCAGCTTAGACAAAATACCACTTCTTTTAGTACTTCTGGTGGATTAAGCATCCATAAAGCAAGAAACATATCAAGAAAGCATCGAAGATATAGATCTTACATAGCTCGAGTTCATGATTCGCTGTTGAAGAAGGTCTTGAGGGGGGAGAAATATCTGAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTTGTTACCGAAGAACAGGCAAATAAACTTTCAAAGAGGAAAGAGGTGGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACCACCCATACTCCACAGTTCTTGGGTCTCCCGCAGGGAGCTTGGTCTCAAGATGGTGGCTTTGAATCTGCTGGAGCTGGGATTGTGATAGGGTTCATTGACACTGGCATTGATCCTTCGCACCCCAGTTTTGCTGATGATTTGACTGATAATCCGTTTCCCATTCCGGCTCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCTTCTGGATCTTGCAACCGGAAGCTTGTGGGAGCACGCCATTTTGCAGCATCAGCTATAACAAGGGGAATATTTAATGCAACTCAGGATTATGCATCACCATTCGATGGTGATGGACATGGCACGCACACAGCTTCAATTGCTGCTGGAAACCATGGCATTCCAGTCATAGTTGCTGGACATCACTTTGGAAATGCCAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTGTACAAAAGTTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGGGTGGATATAATAAGTTTATCAATCACACCAAATCGACGTCCTCCTGGTATTGCAACGTTTTTTAATCCCATTGACATGGCACTGCTCTCTGCTGTAAAGACTGGTATATTTGTTGTGCAAGCGGCTGGCAACACTGGACCGGCACCAAAGAGCATGTCTTCCTTCAGTCCATGGATCTTTACTGTTGGCGCTGCTTCTCACGATAGAAGCTATGCTAACTCTATAAGCCTTGGCAATAATATCACGATCCCGGGAGTTGGACTTGCACCTGGAACTTATAATGACACAAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGACACAAGCGTGTCGGAGGATATGTACGTGGGTGAATGCCAAGACTCGAGCAACTTCGATCAGAATCTGATTGAAGGGAACCTTCTAATCTGCAGCTACTCAATCAGATTTGTGCTAGGGCTTTCCACGGTTAAACAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTAGGCTCAACCCAATTCCTATGAAAATGCCTGGCATCATTGTTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCCTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGCATATGTGGAGGATTGAAGGCAAATTATAGCTCTTCTGCCCCACAAATTATGTACTACTCTGCTAGAGGACCAGATCCTGAAGACAGTTCTCTTGATGATTCTGATATTATGAAACCCAACTTGGTAGCTCCTGGAAATTTTATCTGGGCTGCTTGGAGTTCTGTTGCCACCGACTCTATCGAATTTCTTGGGGAAAACTTTGCAATGATGTCTGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTATCCTAGTTTTAGTCCTTCAGCCATTGCATCTGCACTATCAACCACAGCTTCTCTTTATGACAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTATGCTAACCCCGAACAGAACCAGTCTCCAGCTACACCCTTTGATATGGGAAGTGGTTTTGTGAATGCAACAGCAGCTCTCAACCCAGGGTTGATATTTGATTCCAGTTATAGTGATTATATGTCGTTTCTTTGCGGTATCAATGGATCATCTCCTGTGGTATTCAACTACACAGGCCAGAACTGTGGGCTTTACAATTCTAGCATCACTGGAGCTGATTTGAACTTGCCCTCTGTGACTATAGCAAAACTTAACCAGTCGAGAGTAGTTCAACGAACCGTGACCAACATTGCTGGACCTGAGTTTTACAGCGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAAGTTTCTCCAATTCGATTTACAATCGGCAGTGGTGAGAAACAAGAGCTAACCATATTCTTCAACTCCACGATGAACAGCTCGGTTGCTAGCTTTGGTAGAATTGGACTTTTCGGGAGTGCAGGCCATATAATCAACATCCCTCTTTCAGTAATTTTGAAGATCTCATATAACAATACTACTAATTGA 2529 43.14 MDIIHCTRLLCVVVCFGVFVCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSFSTSGGLSIHKARNISRKHRRYRSYIARVHDSLLKKVLRGEKYLKLYSYHFLINGFAVLVTEEQANKLSKRKEVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGFESAGAGIVIGFIDTGIDPSHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNATQDYASPFDGDGHGTHTASIAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKTGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSISLGNNITIPGVGLAPGTYNDTKYKLIAAIHALNNDTSVSEDMYVGECQDSSNFDQNLIEGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIVSSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASICGGLKANYSSSAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSIEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSFSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYSDYMSFLCGINGSSPVVFNYTGQNCGLYNSSITGADLNLPSVTIAKLNQSRVVQRTVTNIAGPEFYSVGWSAPYGISLKVSPIRFTIGSGEKQELTIFFNSTMNSSVASFGRIGLFGSAGHIINIPLSVILKISYNNTTN* 843
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 30695745 30702825 + CsaV3_6G052690.1 Csa06g03883 535510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa06g03883 842 SUPERFAMILY Subtilisin-like 144 696 IPR036852 GO:0004252|GO:0006508
Csa06g03883 842 ProSitePatterns Serine proteases, subtilase family, serine active site. 615 625 IPR023828 -
Csa06g03883 842 Pfam Peptidase inhibitor I9 34 144 IPR010259 -
Csa06g03883 842 Gene3D Peptidase S8/S53 domain 171 705 IPR036852 GO:0004252|GO:0006508
Csa06g03883 842 Gene3D - 709 833 - -
Csa06g03883 842 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 835 IPR045051 -
Csa06g03883 842 CDD PA_subtilisin_like 390 525 - -
Csa06g03883 842 CDD Peptidases_S8_3 144 651 IPR034197 -
Csa06g03883 842 PRINTS Subtilisin serine protease family (S8) signature 169 188 IPR015500 -
Csa06g03883 842 PRINTS Subtilisin serine protease family (S8) signature 249 262 IPR015500 -
Csa06g03883 842 PRINTS Subtilisin serine protease family (S8) signature 614 630 IPR015500 -
Csa06g03883 842 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 835 - -
Csa06g03883 842 Pfam Fibronectin type-III domain 738 831 IPR041469 -
Csa06g03883 842 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 174 185 IPR023827 -
Csa06g03883 842 ProSiteProfiles Serine proteases, subtilase domain profile. 149 692 - -
Csa06g03883 842 Pfam Subtilase family 169 662 IPR000209 GO:0006508|GO:0008236
Csa06g03883 842 Gene3D - 384 552 - -
Csa06g03883 842 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 142 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g00662 Csa-Chr2:5043791 Csa06g03883 Csa-Chr6:30695745 0 dispersed
Csa06g03883 Csa-Chr6:30695745 Csa06g03738 Csa-Chr6:29827158 6.76E-105 dispersed
Csa06g03883 Csa-Chr6:30695745 Csa07g02348 Csa-Chr7:21727193 2.18E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa06g03883 - - csv:101208681 1627.45