Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00030 ATGGAGTTTCTCAATCCTCTTTCTTTGTTCTTCTTCGTTCTTTCTCTTCTCCTCTTCGTCCTTTTTCTACGAAGATTGCATCGTAAACTTCGCTACCCTCCTGGCCCTACTGGATTGCCCATCATCGGCAACATGTTGATGATGGACCAACTCACCCACCGTGGCCTCGCTCGTCTCGCCACCATCTATGGTGGCCTCTTCCACCTTCGCCTCGGCGTCCTCCACATGGTAGTCGTCTCTACGCCAGACATGGCACGGGAATTCCTCCAAGTTCAAGACGTCGCCTTTGCAAACAGGCCCGCAAACGTTGCAATCTCATATCTCACCTACGATCGTGCCGATATGGCCTTTGCCAATTACGGTCCATTTTGGCGTCAAATGCGAAAGATTTGTGTTATCAAACTCTTTAGCCGTCGACGCGCTGAGTCATGGGCGTCTGTGCGTGACGAAGTTGACACCCTAGTCGAAATCGTTTCGAGAAAAATCCAGCAACCGGTGAATATTGGTGATCTAGTTTTTAGCTTGACACGAAACATAACGTACAAGGCTGCATTTGGATCGAGCTCGCATGAAGGACAAGACGAGTTTGTTAAGATCTTGCAAGAGTTCTCTAAATTGTTTGGAGCTTTTAATATTGCAGATTTTTTGCCATGGTTGGGATGGATTCATGCTCGAGAATTCAATGAAAGATTGGCAAAAGCTAGAAGAGATCTTGATGTGTTCATAGACAGCATAATTGATGAACATTTAGAAAAGAAAATGAAGAAACTAAAGGGAGAAAAAGTTGATGATGAAGAAGATACAGATATGGTTGATGAATTAATGGCATTTCTTGTTGATGATTCAAGTAGCAATGAGTTTGATGATTCACAATCAGTTCTTAAGCTCACTAGAGACCATATCAAAGCCTTAATCATGGATGTAATGTTCGGTGGAACGGAAACAGTAGCTTCGGTAATAGAATGGGCAATGGCGGAATTGATGAAAAATCCTGAAGAGCTAAATAAGGTGCAACAAGAACTCACCCTCGTCGTTGGATTAGATAGGAATGTCCACGAATCGGATCTCGAGAATCTCCCTTACTTAAAATTCGTCGTCAAAGAAACCCTTCGCCTTCACCCCCCGATTCCGCTACTCCTCCACGAGACCGCCGTCGACTCCTCCGTTTCCGGCTACTTTATTCCCACCGGTTCAAGAGTCTGGATCAACGCATGGGCGATCGGTCGAGACCGAACCGCTTGGAAAGAACCGGATCGGTTCTGGCCAGGGAGGTTTCAAAACGATGCTGCTCCGGATTTCAAAGGGAGTGATTTCGAGTTCATTCCATTCGGGTCAGGTCGAAGATCTTGCCCCGGAATGCAGCTCGGACTCTATGCTTGTGAGATGGCGGTTGCGAATCTTGTTCATTGCTTTTCTTGGGAATTGCCCGGCGGAATGACGGCGGATGAGCTCGATATGAACGATTCGTTTGGACTCACTGCTCCCAGGGCGATTCGACTCGTTGCTGTACCGAGTCTTCGACTTAACTCGCCTAAGGAAGAGACAGGAAAATGTATAGAATGA 1563 46.51 MEFLNPLSLFFFVLSLLLFVLFLRRLHRKLRYPPGPTGLPIIGNMLMMDQLTHRGLARLATIYGGLFHLRLGVLHMVVVSTPDMAREFLQVQDVAFANRPANVAISYLTYDRADMAFANYGPFWRQMRKICVIKLFSRRRAESWASVRDEVDTLVEIVSRKIQQPVNIGDLVFSLTRNITYKAAFGSSSHEGQDEFVKILQEFSKLFGAFNIADFLPWLGWIHAREFNERLAKARRDLDVFIDSIIDEHLEKKMKKLKGEKVDDEEDTDMVDELMAFLVDDSSSNEFDDSQSVLKLTRDHIKALIMDVMFGGTETVASVIEWAMAELMKNPEELNKVQQELTLVVGLDRNVHESDLENLPYLKFVVKETLRLHPPIPLLLHETAVDSSVSGYFIPTGSRVWINAWAIGRDRTAWKEPDRFWPGRFQNDAAPDFKGSDFEFIPFGSGRRSCPGMQLGLYACEMAVANLVHCFSWELPGGMTADELDMNDSFGLTAPRAIRLVAVPSLRLNSPKEETGKCIE* 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 425377 428490 + CsaV3_7G000300.1 Csa07g00030 535593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00030 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Csa07g00030 520 PANTHER CYTOCHROME P450 FAMILY MONOOXYGENASE 8 513 - -
Csa07g00030 520 Pfam Cytochrome P450 33 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PANTHER CYTOCHROME P450 84A1-RELATED 8 513 - -
Csa07g00030 520 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00030 520 Gene3D Cytochrome P450 26 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00529 Csa-Chr4:3491229 Csa07g00030 Csa-Chr7:425377 2.25E-12 dispersed
Csa04g00530 Csa-Chr4:3492555 Csa07g00030 Csa-Chr7:425377 5.47E-24 dispersed
Csa07g00030 Csa-Chr7:425377 Csa06g03205 Csa-Chr6:27162625 3.18E-128 dispersed
Csa07g00030 Csa-Chr7:425377 Csa06g03302 Csa-Chr6:27665594 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00030 K09755 - csv:101217850 1000.73