Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00051 | ATGGGTGATACTGAAGATGCTCGTACTGATAACTTGCGAAATCTTCAATGTTCGTTTGGAACATCTTCATCTTCTGCTTTAAAGCATCATTTCTCTATGGATCAACTTAAAATTTCTCAAATGACCTGCTCTCAAGGCCGTCCACAGCATTTCCAGTCGAATTTTCTTGGGGATAATAATAGACGAATTGGGATACCTCCTTGTCCTAACTCGCCGCAGGTCCCACCAATCTCACCGTATTCTCAGATCCCGGTATCTCGTCCGATGAACCAACATAGTTATAATTCAGTTCCTACTCATTCTCGATCGTTATCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGTCCGTCCCCATTTCGTGATTCCCCATCTACATCGAATTCAGATCAGGTTTCTGCGGATACGTCAATGGAGGATAGGGATGCCAGTTCACATTCTTTGTTGCCTCCTTCACCTTATACGAGGGCCAATTCTTCGAAGATGAGTGATGCTTTACCTCCTCGTAAAGCCCATAGGCGGTCTAACAGTGATATTCCATTTGGATTATCTTCGATGATTCAGTCACCTCCTGTTCTCCCTTTTAGTGGCTCAGGTGGATTGGAGCGATCAACAAGTAGCAAAGAGAATGCGGGGATATTTAAGCAAGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTGGAGAAAAGCATTGATAACCATATGGAAGGAATGGGTGAAAAGAAGTCTGAAGGGGACACTGTGGATGATTTGTTCTCTGCTTATATGAATTTGGATAATATTGATTTGTTCAACTCCTCAGTGACTAACGACAAGAATGGTCATGAGAATCGGGAGGATTTGGATAGTAGAGGCAGTGGTACAAAGACAGGGGGTGAGAGCAGTGATAATGAAGCAGAAAGCAGTGTTAACGAAAGTGGGGATAACTCTCAAATGCCTGGATTGAATTCGTCTGCCGAGAAGAGGGAAGGGATTAAACGGACTGCTGGGGGAGATATTGCTCCAAATAACAGACATTACCGGAGTATCTCTATGGATAGCTTCATGGGCAAGTTGCAGTTTGGTGATGAGTCACCCAAAATGCCTCCTACACCACCCGGCATTCGTCCCGGGCAACTTTCTTCAAACAACCTAGTTGACGGTAATTCAACTCCATTCAGCTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTAGCTGAGATTGCACTAACTGATCCCAAACGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCAAAAGAACGAAAAATGCGCTATATATCTGAGTTGGAACACAAGGTTCAGACGCTTCAGACAGAAGCTACCACGCTGTCTGCCCAACTCACACTTCTGCAGCGAGACTCAGTCGGACTTACAAACCAGAATAACGAGCTGAAGTTCCGTCTCCAAGCCATGGAACAGCAAGCACAACTACGGGATGCTCTAAACGAAGCGTTAACTGCTGAGGTTCAGAGATTGAAACTTGCTACAACCGATATAAACGCACAATCTCATCCCTCAAATGGGGTAATGGCTCAATCTTCTATGAACCACCATGGACTCCAGCTTCAGCAGCACCAACAACAGCAACATATGCAGCAGAATGGAAGTGCAGCCACAAAACCAGAATCCAACCAATAA | 1692 | 44.68 | MGDTEDARTDNLRNLQCSFGTSSSSALKHHFSMDQLKISQMTCSQGRPQHFQSNFLGDNNRRIGIPPCPNSPQVPPISPYSQIPVSRPMNQHSYNSVPTHSRSLSQPSFFSLDSLPPLSPSPFRDSPSTSNSDQVSADTSMEDRDASSHSLLPPSPYTRANSSKMSDALPPRKAHRRSNSDIPFGLSSMIQSPPVLPFSGSGGLERSTSSKENAGIFKQASQFVKREPSLEKSIDNHMEGMGEKKSEGDTVDDLFSAYMNLDNIDLFNSSVTNDKNGHENREDLDSRGSGTKTGGESSDNEAESSVNESGDNSQMPGLNSSAEKREGIKRTAGGDIAPNNRHYRSISMDSFMGKLQFGDESPKMPPTPPGIRPGQLSSNNLVDGNSTPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATTDINAQSHPSNGVMAQSSMNHHGLQLQQHQQQQHMQQNGSAATKPESNQ* | 564 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 573566 | 578114 | + | CsaV3_7G000510.1 | Csa07g00051 | 535614 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00051 | 563 | CDD | bZIP_plant_RF2 | 422 | 471 | IPR044759 | GO:0003700|GO:0006355 | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 275 | 289 | - | - | |
Csa07g00051 | 563 | Pfam | bZIP transcription factor | 421 | 475 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00051 | 563 | Gene3D | - | 420 | 472 | - | - | |
Csa07g00051 | 563 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 419 | 482 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - | |
Csa07g00051 | 563 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 76 | 551 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 270 | 342 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 355 | 383 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 290 | 320 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 151 | 165 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 58 | 212 | - | - | |
Csa07g00051 | 563 | SMART | brlzneu | 417 | 481 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00051 | 563 | SUPERFAMILY | Leucine zipper domain | 421 | 472 | IPR046347 | GO:0003700|GO:0006355 | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 83 | 115 | - | - | |
Csa07g00051 | 563 | Coils | Coil | 437 | 492 | - | - | |
Csa07g00051 | 563 | PANTHER | ZIPPER TRANSCRIPTION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED | 76 | 551 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 518 | 563 | - | - | |
Csa07g00051 | 563 | MobiDBLite | consensus disorder prediction | 181 | 195 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa03g03682 | Csa-Chr3:32767388 | Csa07g00051 | Csa-Chr7:573566 | 4.37E-06 | dispersed | |
Csa07g00051 | Csa-Chr7:573566 | Csa07g01423 | Csa-Chr7:14447945 | 2.84E-48 | dispersed | |
Csa07g00051 | Csa-Chr7:573566 | Csa07g00052 | Csa-Chr7:584738 | 0 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32235 | PF00170 | bZIP_1 | 8.70E-09 | CL0018 | Csa | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00051 | - | - | csv:101215703 | 1041.57 |