Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00091 ATGAACAGCTTCCGCCGCTCTCCGCCGTCTCCCTCCGCCCTCAAATGGCTCGGCTTAGTTACCGCCATCTGGGTCCAATCCATCTCTGGTAACAACTACACCTTCTCTAACTACTCCGCCGCTCTTAAATCCCTCATGAATCTCTCTCAGCTTCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAAGCATTCGGTCTCCTCGCCGGCCTCGCCTCCGACCGCCTCTCCACTTCTCTCCTCCTCCTCATCGGCTCCATTGAAGGCCTTATTGGCTACGGCGCTCAATGGCTCGTTGTCAGTCAAAAAATCAAACCCCTCCCTTACTGGCAGATGTGTATCTTTCTGTGTATGGGAGGGAATAGCACGACTTGGATGAATACCGGCGTGCTTGTTACTTGCTTAAGAAACTTCCGAAAAAACAGAGGAACTGTTTCTGGTATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTTACAGATTTTTGTTCCGCTCTTTTCTCTGATAATCCCTCTTCTTTTCTCGCCCTTCTCTCCCTTGTCCCCTTCGCCGTTTGCCTTGCTGCTATTCTCTTCCTTCGTGAAGTCCCCCGTTCCGCCGATGATGAAACAGAGGAGTTCAAATACTTCTGGGTACTCAACGCCGTTTCCGTCGCCGTTGCCGTCACTCTCTTGGTATTTGATTCGATTCCAAATCCCAACTCATTCCTATCGAGAATCTTCTGCATCGTTTTGCTGAGTTTGCTGGTTTCACCTCTGGTAATCCCACTTCACTCGTTCTTGAAAAACAAGGGTGGGTCTGGTGAGGTTGCAGAGGCGCTATTGGCGGGTGAGAGTGGAGCGGATAATGCAGTGGAGGGTAAGCCAGTGATCGGAGAAGATCACACGATTGTTGAGGCGATGAAGACGTTTGAATTTTGGATTATGTTTGTGTCGTTTTTGTGTGGAGTGGGTACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGGTATGACGACGTTTCGATCTTCATATCGTTGATGAGCATTTGGGGGTTTTTTGGCCGGATTCTATCGGGATCGGCATCGGAGCATTTCATCAAGAAAGCAGGAATGCCAAGGCCACTATGGAATGCAGCTTCCCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATCCCCGGTTCCTTATACATTGGCTCCATCGTAGTCGGTATTTGCTACGGTGTCCGTCTCGCCATCACCGTCCCGATGGCCTCTGAAGTCTTTGGTCTCAAGAACTACGGCATGATCTACAACGTTCTAATCCTCAACCTCCCTCTTGGTTCGTTCCTCTTCTCAGGGCTCTTGGCCGGGATACTCTATGACATGGAGGCAACAACGACGAAGACGGGCGGCAATACGTGCGTGGGTGCGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGCGATAGGGTTTGCCATGGACTCATTTTTGGCCTTTAGAACCAAAAGACTGTACTCCAAAATGAGGGCTCTAAAGAGATGA 1548 49.42 MNSFRRSPPSPSALKWLGLVTAIWVQSISGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLAGLASDRLSTSLLLLIGSIEGLIGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRKNRGTVSGILKGYIALSTAIFTDFCSALFSDNPSSFLALLSLVPFAVCLAAILFLREVPRSADDETEEFKYFWVLNAVSVAVAVTLLVFDSIPNPNSFLSRIFCIVLLSLLVSPLVIPLHSFLKNKGGSGEVAEALLAGESGADNAVEGKPVIGEDHTIVEAMKTFEFWIMFVSFLCGVGTGLAVMNNMGQIGLALGYDDVSIFISLMSIWGFFGRILSGSASEHFIKKAGMPRPLWNAASQILMALGYILLAIAIPGSLYIGSIVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDMEATTTKTGGNTCVGAHCYRLVFVVMACSCAIGFAMDSFLAFRTKRLYSKMRALKR* 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 846941 851979 - CsaV3_7G000910.1 Csa07g00091 535654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00091 515 SUPERFAMILY MFS general substrate transporter 32 505 IPR036259 -
Csa07g00091 515 Gene3D MFS general substrate transporter like domains 14 208 IPR036259 -
Csa07g00091 515 Gene3D MFS general substrate transporter like domains 302 506 IPR036259 -
Csa07g00091 515 Pfam Nodulin-like 15 259 IPR010658 -
Csa07g00091 515 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 279 514 - -
Csa07g00091 515 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 5 270 - -
Csa07g00091 515 CDD MFS_Mch1p_like 14 492 - -
Csa07g00091 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 270 - -
Csa07g00091 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 279 514 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01375 Csa07g00091 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00183 Csa-Chr4:1049693 Csa07g00091 Csa-Chr7:846941 4.49E-103 dispersed
Csa06g00642 Csa-Chr6:5355252 Csa07g00091 Csa-Chr7:846941 1.68E-45 dispersed
Csa07g00091 Csa-Chr7:846941 Csa04g02020 Csa-Chr4:20332608 6.90E-92 dispersed
Csa02g01375 Csa-Chr2:13204393 Csa07g00091 Csa-Chr7:846941 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00091 - - csv:101205980 937.176