Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00098 ATGGACGACGGGGAGCTTGATTTTTCGAATCAGGATGTGTTTTCCAGCCCTAATATGGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGATACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCATACCCACACGTGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTCGTTACTGATGATACTGCAGAATCAACTGAGAAGAAGTCGAAGAAACGTCCATTGGGTAACCGTGAAGCTGTTCGTAAGTACCGTGAGAAGAAGAAGGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCTTTGAATCAGCATTTGATGAAGAGGCTGCAGGGGCAAGCAGCACTTGAGGCTGAGATTGCTAGGCTTAAGTGTTTGCTTGTTGATATTAGGGGTAGAATTGAAGGGGAGATTGGTTCTTTCCCTTACCAGAAAGCTCTTAATCCTAACTTGTCCAACCCAAGCATGTCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCTGGGGTCGATGGCAGCAGAAGCAGTGAAGGTGCTGTGATTAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCTTCAATGTTTGGCAAATCATGACTCAGGATCAAAAGAACTGCCTGGGTGTGGAGTAGGGAATGCGGTTTCAACTGATGTTTCTTCAGGGGCGACGAAGAAAAAAGGAGGAAGCCGTAAAGAGACATGGACCTGA 813 45.02 MDDGELDFSNQDVFSSPNMEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKALNPNLSNPSMSGAYVMNPCNMQCEDQVYCLHPGVDGSRSSEGAVINGQSFGACEFENLQCLANHDSGSKELPGCGVGNAVSTDVSSGATKKKGGSRKETWT* 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 903274 906284 + CsaV3_7G000980.1 Csa07g00098 535661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00098 270 Coils Coil 98 132 - -
Csa07g00098 270 MobiDBLite consensus disorder prediction 249 270 - -
Csa07g00098 270 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
Csa07g00098 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Csa07g00098 270 PANTHER BASIC LEUCINE ZIPPER 23 1 241 - -
Csa07g00098 270 MobiDBLite consensus disorder prediction 71 107 - -
Csa07g00098 270 Gene3D - 75 153 - -
Csa07g00098 270 SUPERFAMILY Leucine zipper domain 89 135 IPR046347 GO:0003700|GO:0006355
Csa07g00098 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 241 - -
Csa07g00098 270 MobiDBLite consensus disorder prediction 71 103 - -
Csa07g00098 270 Pfam Basic region leucine zipper 86 142 IPR004827 GO:0003700|GO:0006355
Csa07g00098 270 CDD bZIP 91 144 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa02g01394 Csa07g00098 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01394 Csa-Chr2:13341061 Csa07g00098 Csa-Chr7:903274 1.64E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32240 PF07716 bZIP_2 8.80E-14 CL0018 Csa TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00098 K25785 - csv:101208161 538.11