Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00118 | ATGTCTGCGGATGTAATACGCAAGGCGTTTCAAGCGACGGAAGAGGGTTTTCTTTCAATAGTTCGAAGTCAATGGCCAACAAATCCTCAAATTGCAGCTGTGGGTTCATGCTGTCTAGTTGGTGTAATTTGTGATGGGACTCTCTATGTTGCAAATCTAGGCGATTCACGTGCTGTTTTGGGTAGAGCAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTATCAACAGAGCACAATGTTTCCAATGAGTCAGTGAGGCAAGAGCTGCAGTCTTTGCATCCTGATGACCCGCAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCTATAGGTGACGTGTACTTGAAAAAAGCTGAGTTCAATAGAGAACCATTGTATGCAAAGTTTCGAGTTCAGGAACCTTTCAGAACGCCATTTTTGAGCGCTGAACCAGCCATTTCTGAGATCCAGTTGAAACCAGATGATCAATTTGTTATATTTGCATCAGATGGTTTGTGGGAGCACCTTAGCAATCAGGAAGCGGTTGATATAGTTCATAGCCACAAACAAAGTGTGAGATCTCTATCTAATTTTTCTCGGGGAAGTGCAAAAAGACTGGTCAGAGCTGCACTTCAAATAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATCGGCCGTGGCGTCCGTCGCCATTTCCATGATGACATCACTGTGGTGGTTGTATTTCTTGATACAAATCTGCTCTTCAAAGCTAGCTCCATGAAGAGCATGAGCGTCTCACTTCGAGGTGGTGGACTCAACCGGCTTCCTAACTCTTTATCCCCTGTCACTACGCCCGTGTAG | 864 | 44.44 | MSADVIRKAFQATEEGFLSIVRSQWPTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRAVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDPQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYAKFRVQEPFRTPFLSAEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHKQSVRSLSNFSRGSAKRLVRAALQIAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNLLFKASSMKSMSVSLRGGGLNRLPNSLSPVTTPV* | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1052155 | 1054439 | + | CsaV3_7G001180.1 | Csa07g00118 | 535681 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00118 | 287 | CDD | PP2Cc | 4 | 250 | IPR001932 | - | |
Csa07g00118 | 287 | Pfam | Protein phosphatase 2C | 4 | 206 | IPR001932 | - | |
Csa07g00118 | 287 | Gene3D | - | 2 | 258 | IPR036457 | - | |
Csa07g00118 | 287 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 276 | - | - | |
Csa07g00118 | 287 | PANTHER | PROTEIN PHOSPHATASE 2C 60-RELATED | 1 | 276 | - | - | |
Csa07g00118 | 287 | SMART | PP2C_4 | 1 | 248 | IPR001932 | - | |
Csa07g00118 | 287 | SUPERFAMILY | PP2C-like | 3 | 251 | IPR036457 | - | |
Csa07g00118 | 287 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 250 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g03363 | Csa-Chr6:28014814 | Csa07g00118 | Csa-Chr7:1052155 | 6.36E-145 | dispersed | |
Csa07g00118 | Csa-Chr7:1052155 | Csa07g00698 | Csa-Chr7:4993281 | 4.34E-103 | dispersed | |
Csa07g00118 | Csa-Chr7:1052155 | Csa02g01405 | Csa-Chr2:13428092 | 1.51E-159 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00118 | - | - | csv:101211601 | 538.88 |