Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Csa07g00128 | ATGGCGAATCTCTCCGCTCTGGTTCACGAGCTTCGAGAACGTATAGCAGCTTCCTCATCCACTCCTAATCGCGCAGATGACTTCGGTCTCGAAGTCCGATTTCGCGCCTTCCTTCCCAATCTTCTTCACGATCACGTCGTTCCATCTTCCTCAGTAAATGAGAGAGAAGTAGTTGCTGTATTGAAGCTCATCTCGATCACTGCCAGGAACTTTCCTGGCGTTTTTTACCATGGAAAGGCTAGCGCCATTTTGCCTGTGATTGCTCGGATATTGCCTTTTTTTGCGGAGACTACTATCCAGGCACAACATGGAGTCATTTTTGAAACCGTTGGTTCCCTTTTATCCTTGCTTCGTACTGGAGCACGGGATGCGTACCGTCAATTTTTTCTCGATGCCATGTCAGTTGTTGAAGATATTTTATACACTGCATCACTTGGCACTGATACTTCAAGCTTTGTGGAGTCCACAAGTATCAATTTGAGTTGTTTCTGTGAATCTTTAAAAGGAATCTTTGAGGATCCCGATCATCTTGGGGATCTTCCAGAAGTCAACAGACCAACTAATGGCTCTGGTATTTTGATAAATCTAACGGGGAAAAAGAGGTGGCGGCCTTTTGCAACTTGGATTATTAAGCTTCTTGGTAGATGCTTGGCTGAGGGAACTGTATATGTTGAAGGACTTATCAGTATGTCAGATGTTTCAGCAGCATGTTCATTATTATGTTATGGGGATGCTGATTTGCAAATGGCATGTTTTGACTTTGCACGTATTGTTGGCTTGGTGATAGACGACATCGTTCCTTATCAGCCTTTAATCCAGTCAATATCTACTATATTAAGTGAAGACAAACAGGGGCTTCCTGTATTTAGGAACATACCATATGATAATTCTATTGGGGGTTGTCTTAATGTGCTATACTCCAATTGTTGTGACGATGTTGTCAAGCTAACTGCTGCAGACATGGTTGGCATATTTTCACAGTCATTGTGGAGAACCAAGAGCATGGAGCTCAAGGTTTCCTTATGCAATGCATACATGCGGATTGCTAAAATCTGTCCTCCTCATATCTGGAGGCCTGAAATACTCGTTGATATGCTTTCTTTTCCAGAACCTTGCTTTGCTTTGATAGATTGCTTCAAAGCAGTTCTATCTATTCTTGGTCCTGATTATGTTGGAGGGTCTTTACCAGGCATGGGTTCATCAGAATTGAGCAATAAATCAACTGAAATCTCTCGAATTGGAGAAAAGAGACCCTTTGAGGAGTTGGATATCGTGAAGAAAAAAAGACCAAAGATGGATGGAGAAATTGTGAGCTCCGAAGCTGATATTATGGTTGAGTGCAAGAAGCCTCACATCAAAATTTGTGAAACTGAAGAAACTTATGCAAATAATTTGCATAATTTACTTGTTTCATTTGTTGGATGTTTAAAAGCTTCTTCCTTCAGGGCTGATGCTTTAAGACCAGAAGTTTCACTAACAGCTCTTAGCATGCTGTGTATTGCTTTCTGTCGGTACCCTGAAACTCGTTTGTCCATGGTCATATTTCAGGAAATGGTTTCATGGATTCCCTGGATATATGAGCAGGCGAAGAAAGGAAGCTCAATTTCCATCGACATCTCCATTTTTCTTGAAGGAATTCACAACATACTTCTTTTACCAAACCATATATCTTCATGTTTATTTTCACTCTTGTCTGGAAGTAATGGTGAATGTGCTGAAACAATGTCTGTGATACTTAAAGTTCCATGGACCCATTCAATCACCAGTACTGAATCTCACAAGCCATGGAAGACAAGATGCATCTCTGTTCAGGTTTCGTCAAAAATTACTTCTATCACGAAGGATGAAACTGATCTTGAGATCCTGGATTTGAGTCTTGTTGATGAAAATGATGAAGTTAGAACTGAGGCTGCCATTTCAATTCCAGTGATTGCTCTATGGACTGGTTTTGACAGGCTAACACCGTTGTTTAGGAGACTGGAGATCTTGAAGGAAGAAATGCATGAAAAAGTTAAGAAGATTATCCCAGTTTCTCTTGGGTTTTTATCATGCCTGTATGGATCTTGCCATTCAGTGAGTAGGTGCAAATTATTTTTAAATACCAACAGTGATAGATGTTGCCAGACAGTTAACTATGTGTTACAAGGATTTTGGTGTTCAAAATGTGATCGGACTGTTCTGCATGATCATAAACTTTATGCAAATATAATTGAGCAATCTGACTTTTACCCAAAAATGAATTTGGATAGTGATTTTGTCCATTTAGTGTCGATGTTTTTCAAACTTCTTTTTGATGAGTCTTCAGAAGAGGTTCAATTGTCCTGCGTGGGAACTCTTAGACGAATTCTGGTCCATGGGAGTAGGGATGTTCTACATCAAACGAAGACCGATTGGCTTAAATGTGTTGAGTTTTTGCTTCTGAACAGAAAAAAGTCAATTAGAGAAGCATTCTGCCTTCAAATTAGTTCCTTCCTAGAGGATCACATCACAAGTTGCTTTTTCTCAGAAGAAGATATTTCAAACAAAAGGAAAGAGCTAATGTTTTTGGATTTTATTAAAACTGCAATGGTATCAACTGCAGATCCCCAAATTCTGGACACTATACTAGAATCTGTAGCAGAGCTCATGAATGCAGTTGATATTCACAGTGACTTTTTCTCCCTGTCTCTTTTATTGTTGGTTGATCATCTTGATAATCCATACATAGCAGTGAGGTTGAGTGCTTCAAGGGCTATCCACAGAGCTTGTTGTTTCCATTTTAAAGGGAATTTTAATATGATATTTTCAAAAGTTATCCATCTACGTAATGAGCTATTTGATCACGTCTCTAGCAGACTTGTTAACCATCCAAAAATCGTACAAGAATTTGCAGAAGCTGTTTTGGGTGTTGAAACTGAAGTGTTTGTTAAGAAAATGATTCCTGTTGTTCTTCCGAAGCTGATTGTCTCTCATCAGAACAATGATCAAGCTGTTGAATCTTTATATGAATTAGCTAAATGTGTGGACACAGATATGGTTACGTTAATAGTAAATTGGTTGCCAAAAGTTCTTGCCTTTGTTCTCTACCAAGCAAATGGGAAGGAGTTATGTTCTGCCTTGGAATTTTATCATGCTCAGACGGGTTCAACTCAGGAAGAAATTTTTGCTGCTGCATTACCTGCACTTCTTGATGAACTAGTATGCTTTGTGGATGGTGGCAATTCAGATGAGGTCAGTAAAAGGTTAGCAAGAGTTCCTGAGATGATATTACAAGTTGCTAGAGTTCTTACTGGAGGAGATGATCTTCCAGGATTTTTGAGGAATCATTTTGTTGGCCTCCTTAACAGCTTGGATAGGAAAATGCTCCATGCAGAGGATGTTTGCCTGCAGAAACAAGCCCTGCAACGAATTGAAATGCTGATAAAGTTGATGGGTTCTCATCTTAGTACCTATGTGCCAAAACTAATGGTTCTTCTTATGCATGCTATTGGGAAAGAAGAACTGCAAAGTGAAGGTCTCATTGTTTTGAATTCTTTTATCCAACAACTGGCTATGGTATCACCATCTAGCATCAAGTATGTGATTTCTCAAGTCTTTGCTGCACTTGTGCCTTTCCTGGAGAGAGATGAAACTTCCACACATTTAGATATGGTGGTAAAAATTTTGGAAGAGCTTGTTTTAAAAAACAAGAGTATACTAAAGGTGCACATACGCGAATTCCCTCCACTGCCTTGTATTTCTGCTCTGACAGAAGTGAACAGAGCTATAAATGAAACTCGTGGATCAATGACTCTAAAGGATCAATTACGAAATGTTGTAGATGGCTTAAATCACGAGAACTTAAAAGTGAGATACATGGTGGCATGTGAATTGAGAAAATTGTTGAACATGAGAAGCAAGGAGGTTACAACTTTGATAAGTGCTGAAGCTGATCTAGACATGGATGTTCTGAGCTTACTAATCTCATCCTTGCTAAGAGGGTGTGCTGAGGAGTCAAGGACTGCAGTGGGCCAACGGCTGAAATTGATTTGCGCTGATTGTATTGGTGCACTAGGTGCTGTTGATCCTGCTAAAGTGAAGAGTTTTTCTTGTGAACGATTTAAAATTGAATGTTCTGATGATGATCTAATTTTTGAGTTGATTCACAAACACTTAGCTCGGGCTTTTGGAGCTGCACCAGATACCATTATTCAAGATTCAGCGGCATTAGCCATTCAGGAGCTTCTAAAAATTGCAGGGTGTAAGGCATCGTTAGATGACAATACTGCTCCTTCAGCATCACCATCGTTGAAAGATAAAGAAACTTCAAAAACTGTCGCATCTGATTCTTCTGATGATGATCATGCGATGAGTATAAGAGGTCAGAGATTGTGGGGACGTTTCTCTGATTATGTGAAAGAAATTATAGCGCCGTGCTTAACCTCAAGATTTCAACTCCCAAATGTGGTTGACTCTGCATTTGCTAGTTCAATATATCGACCAGGCATGTCATTCAGAAGGTGGATATATTTTTGGATAAGAAAACTAACTGCACATGCAACTGGGTCTCGTGCAGGTATTTTTCATGCTTGTCGCGGTATAGTGCGGCATGATATGCAGACAGCTGTTTATTTGCTGCCTTATTTAGTTCTTAGTGCTGTCTGTCATGGGACAGAGGAAGCACGACATGGCATAACAGAAGAAATCTTGTCTGTTCTCAATGCTGCAGCAGCAGAGAATGGTGTGGCTTTGATTCACGGAAATACTGGGGGGCAAAGTGATGTTTGTATTCAAGCCGTGTTTACTCTTCTTGATAATCTAGGACAGTGGGTGGATGATGTTGAACGAGGATTGTCACTTTCTCAATCTGGTCAGTCATCGTCTTCTAAGCATTTGGTGGCCAAATCAAAGGAATCAAGTTCAAATGTTCATGTTGATCAGGAGCAACTCCTGGTTCAGTGTAGGTATGTTTCACAGCTTTTAGATGCAATTCCAAAGACCACTCTTGCTAGGGCTTCCTTGAGTTGTCAGGCCTATGCTAGATCTTTGATGTATTTTGAGTCATATGTACGAGGAAAATCTGGTTCTTTTAACCCTGCGGCTGAGAGGAGTGGCATCTTTGAGGATGAAGATATTTCATATCTCATGGAAATATATAGTTTCCTTGATGAGCCTGATGGTCTATCTGGCTTGGCATGTTTACGTAAATCCTTGAGGTTACAAGACCAACTTTTGATAAATAAAAAAGCTGGAAACTGGGCAGAAGTTTTGACTTTTTGTGAACAGGCCTTGCATATGGAACCAAATTCAGTTCAAAGGCATTCGGATGTTCTTAATTGTTTGTTAAATATGTGCCACCTCCAAGCTATGGTTACTCATGTGGATGGTTTAATCACGAGGATTCCTCAGTACAAGAAAACGTGGTGCATGCAAGGAGTGCAGGCAGCTTGGAGGCTTGGCAGGTGGGACCTCATGGACGAATACCTCAAGGGAGCTGATGAGGAAGGCCTTCTTTGTAGCAGCTCTGAGAGTAATGCTTCTTTTGACATGGACGTAGCAAAAATTCTGCAGGCAATGATGAAGAAGAATCAGTTTTCAGTTTCTGAGAAAATTGCTCTATCCAAACAGTCTCTGATTGCCCCTCTTGCTGCTGCTGGCATGGATTCTTACGCACGTGCTTATCCATTTGTTGTGAAACTCCACCTTTTGAAAGAGCTTGAGGACTTCCATAACCTTCTCTTTAATGACTCTTTCTTGGAAAAATCATTTCATGTAGATGATCAGGAATTTTCAGAAATGATACAAAATTGGGAGAACCGGCTGAAATTTACTCAGTCATCACTCTGGGCAAGAGAGCCACTCCTGTCATTTCGGAGATTGGTTTTTGGTGCTAGTAGTCTTGGTGCTCAAGTTGGGAACTGTTGGCTTCAGTATGCAAAGCTCTGTCGCTCTGCTGGCCATTATGAAACAGCAAACCGTGCAATTCTTGAAGCTCAAGCCTCTCGTGCACCTAATGTCCATATGGAGAAAGCAAAACTTTTATGGAGTACTAGGCGGTCTGACGGTGCTATCTCAGAATTGCAACAATCTCTTCTAAATATGCCTGTGGAAGTCATAGGATCTGCTGCAATGTCATCAATAACAAGCCTTTCCTTGGTTCCAATGAACCCAGCTCCTTTAATCTGTGATACACAAACTTTGAATGAGAATAGAGATATTGCAAAGACTCTTCTCCTATACTCAAGGTGGATACATTGCACTGGGCAAAAGCAAAAGGAAGATGTCATCAATCTTTATTCAAGAGTGAAGGAGCTACAGCCCAAGTGGGAGAAAGGATATTTTTTTATGGCCAGGTACTGTGATGAATTGCTTGAAGATGCCAGGAAACGCCAGGAAGATAGTTTCGAACAAGGTTCGAGAAAAGTCTCATCATCTTCTACTGCTATTGGCCCTCCAAATTTAAATAATGAGAAGCCCTGGTGGTCTTATGTGCCTGATGTACTCCTGTTCTATGCAAAAGGACTTCACAGGGGTCACAAGAATCTATTTCAAGCACTTCCAAGGTTGTTAACTCTGTGGTTTGACTTTGGAAGCATCTACCAAAGAGTTGGTTCACCATCCAACAAGGAGTTGAAAAGTGTTCATGGAAAGGTTCTGAGCATCATGCGGGGTTGTTTAAAGGATTTGCCAGCATATCAATGGTTGGCTGTACTGCCTCAGTTAGTTTCAAGGATTTGTCATCAGAATGAAGAAACTGTTCGATTGGTTAAATACATAATTGCTTCTGTTGTCCGACAGTATCCACAGCAAGCGCTTTGGATAATGGCTGCAGTTTCAAAATCCACTGTTCCTTCAAGACGAGAGGCAGCTATGGAGATAATCTATTCTGCAAAAAAAGATTTCAGTCAAGGAAAGGGTGGCAACAATTTATTTCTTCAGTTTGCCAGTCTAATTGATCATTTAATCAAGTTGTGCTTCCATCCAGGTCAACAAAGGGCGAAGAACATTAATATTTCTACGGAATTTAGCACATTGAAGAGAATGATGCCATTGGAGATTATTATGCCAATTCAACAATCTCTGGTTGTTAATCTGCCGACATATGATGTGAATCTCACTGATTCACCGAGTTCTGACATCTTTTCTGGCACAGAGCTTCCTACAATATCAGGAATAGCTGATGAGGCTGAGATTCTTTCATCACTTCAGCGGCCTAAGAAAATCATTCTATTGGGTAGTGATGGTATTGAGCGACCATTCCTCTGCAAACCCAAGGATGATCTCCGGAAAGATGCTCGCATGATGGAGTTCACAGCAATGATTAATCGTTTATTATCCAAATATCCAGAAAGCCGCCGGAGGAAGCTCTACATACGCACTTTTGCTGTGATACCTCTGACAGAGGATTGTGGTATGGTAGAATGGGTTCCCCATACTCGTGGTCTAAGACATATACTGCAAGACATATATATTACTTGCGGTAAGTTTGACAGGCAGAAGACAAATCCCCAAGTTAAGCGAATATATGATCAGTGCCAAGGTAAAATACCTGAAGGTGAGATGCTGAAGACAAAAATTCTCCCTCTGTTCCCTCCCGTTTTCCATAGATGGTTTTTAAATACCTTTTCAGAACCAGCTGCTTGGTTTAGAGCCCGGATAGCTTATGCACATACAACTGCAGTTTGGTCTATGGTTGGGCATATTGTGGGGTTAGGTGATAGACATGGTGAAAATATTCTTTTTGATTCTACTACGGGTGACTGCGTTCATGTCGATTTCAGTTGTTTATTTGACAAAGGTCTGCAGCTTGAAAAGCCTGAATTGGTGCCGTTTAGGCTAACCCAGAACATGATCGATGGATTAGGAATCACTGGTTATGAGGGCATTTTCTTGAGAGTTTGTGAAATTACTCTTTCTGTATTAAGATCTCATCGGGACACTTTGATGAGCATACTTGAAACTTTCATTCATGATCCACTTGTGGAGTGGACAAAATCTCACAAATCCAGTGGTGTTGAAGTTCAGAATCCACATGCTCAGTTAGCCATCAGTAACATTGAGGCTAGGTTACGAGGTGTAGTTGTTGGCGTTGGAGCTGCACCATCTTTGCCCCTGGCTGTTGAAGGTCAGGCTCGTCGATTAATTGCTGAAGCAGTTGCACACAAAAATCTTGGGAAGATGCTTTTCCAGCATTCTCTCCCAGTCGCCCTAGGCTCTTCTGCCAACTTGGCAAAGTTTCTTGGAGGACAGATTCTTGGCAAACTAAGGCCTTTTTTTAATGAATGTAAAGCAAGCGCAGTCCATGATCTCTCCAAGCAGGCACTGTTGTTATTACCTTCGAAACTCCAAGGTCCAATGCAACTTCTTTTATACGTTTTGGCTCATGTTGCTACCTACCTCACCACTAGCGTGGTTTTTGGTAGTATTGTCGATCATATCAGGGAAGAAGCCCTTAAGGGGTGGTTTTGTGCTAAATCTTTGAAATGTTTTGAGGGAAGTTCCTTGAAATAG | 8469 | 40.83 | MANLSALVHELRERIAASSSTPNRADDFGLEVRFRAFLPNLLHDHVVPSSSVNEREVVAVLKLISITARNFPGVFYHGKASAILPVIARILPFFAETTIQAQHGVIFETVGSLLSLLRTGARDAYRQFFLDAMSVVEDILYTASLGTDTSSFVESTSINLSCFCESLKGIFEDPDHLGDLPEVNRPTNGSGILINLTGKKRWRPFATWIIKLLGRCLAEGTVYVEGLISMSDVSAACSLLCYGDADLQMACFDFARIVGLVIDDIVPYQPLIQSISTILSEDKQGLPVFRNIPYDNSIGGCLNVLYSNCCDDVVKLTAADMVGIFSQSLWRTKSMELKVSLCNAYMRIAKICPPHIWRPEILVDMLSFPEPCFALIDCFKAVLSILGPDYVGGSLPGMGSSELSNKSTEISRIGEKRPFEELDIVKKKRPKMDGEIVSSEADIMVECKKPHIKICETEETYANNLHNLLVSFVGCLKASSFRADALRPEVSLTALSMLCIAFCRYPETRLSMVIFQEMVSWIPWIYEQAKKGSSISIDISIFLEGIHNILLLPNHISSCLFSLLSGSNGECAETMSVILKVPWTHSITSTESHKPWKTRCISVQVSSKITSITKDETDLEILDLSLVDENDEVRTEAAISIPVIALWTGFDRLTPLFRRLEILKEEMHEKVKKIIPVSLGFLSCLYGSCHSVSRCKLFLNTNSDRCCQTVNYVLQGFWCSKCDRTVLHDHKLYANIIEQSDFYPKMNLDSDFVHLVSMFFKLLFDESSEEVQLSCVGTLRRILVHGSRDVLHQTKTDWLKCVEFLLLNRKKSIREAFCLQISSFLEDHITSCFFSEEDISNKRKELMFLDFIKTAMVSTADPQILDTILESVAELMNAVDIHSDFFSLSLLLLVDHLDNPYIAVRLSASRAIHRACCFHFKGNFNMIFSKVIHLRNELFDHVSSRLVNHPKIVQEFAEAVLGVETEVFVKKMIPVVLPKLIVSHQNNDQAVESLYELAKCVDTDMVTLIVNWLPKVLAFVLYQANGKELCSALEFYHAQTGSTQEEIFAAALPALLDELVCFVDGGNSDEVSKRLARVPEMILQVARVLTGGDDLPGFLRNHFVGLLNSLDRKMLHAEDVCLQKQALQRIEMLIKLMGSHLSTYVPKLMVLLMHAIGKEELQSEGLIVLNSFIQQLAMVSPSSIKYVISQVFAALVPFLERDETSTHLDMVVKILEELVLKNKSILKVHIREFPPLPCISALTEVNRAINETRGSMTLKDQLRNVVDGLNHENLKVRYMVACELRKLLNMRSKEVTTLISAEADLDMDVLSLLISSLLRGCAEESRTAVGQRLKLICADCIGALGAVDPAKVKSFSCERFKIECSDDDLIFELIHKHLARAFGAAPDTIIQDSAALAIQELLKIAGCKASLDDNTAPSASPSLKDKETSKTVASDSSDDDHAMSIRGQRLWGRFSDYVKEIIAPCLTSRFQLPNVVDSAFASSIYRPGMSFRRWIYFWIRKLTAHATGSRAGIFHACRGIVRHDMQTAVYLLPYLVLSAVCHGTEEARHGITEEILSVLNAAAAENGVALIHGNTGGQSDVCIQAVFTLLDNLGQWVDDVERGLSLSQSGQSSSSKHLVAKSKESSSNVHVDQEQLLVQCRYVSQLLDAIPKTTLARASLSCQAYARSLMYFESYVRGKSGSFNPAAERSGIFEDEDISYLMEIYSFLDEPDGLSGLACLRKSLRLQDQLLINKKAGNWAEVLTFCEQALHMEPNSVQRHSDVLNCLLNMCHLQAMVTHVDGLITRIPQYKKTWCMQGVQAAWRLGRWDLMDEYLKGADEEGLLCSSSESNASFDMDVAKILQAMMKKNQFSVSEKIALSKQSLIAPLAAAGMDSYARAYPFVVKLHLLKELEDFHNLLFNDSFLEKSFHVDDQEFSEMIQNWENRLKFTQSSLWAREPLLSFRRLVFGASSLGAQVGNCWLQYAKLCRSAGHYETANRAILEAQASRAPNVHMEKAKLLWSTRRSDGAISELQQSLLNMPVEVIGSAAMSSITSLSLVPMNPAPLICDTQTLNENRDIAKTLLLYSRWIHCTGQKQKEDVINLYSRVKELQPKWEKGYFFMARYCDELLEDARKRQEDSFEQGSRKVSSSSTAIGPPNLNNEKPWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSIYQRVGSPSNKELKSVHGKVLSIMRGCLKDLPAYQWLAVLPQLVSRICHQNEETVRLVKYIIASVVRQYPQQALWIMAAVSKSTVPSRREAAMEIIYSAKKDFSQGKGGNNLFLQFASLIDHLIKLCFHPGQQRAKNINISTEFSTLKRMMPLEIIMPIQQSLVVNLPTYDVNLTDSPSSDIFSGTELPTISGIADEAEILSSLQRPKKIILLGSDGIERPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRHILQDIYITCGKFDRQKTNPQVKRIYDQCQGKIPEGEMLKTKILPLFPPVFHRWFLNTFSEPAAWFRARIAYAHTTAVWSMVGHIVGLGDRHGENILFDSTTGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFLRVCEITLSVLRSHRDTLMSILETFIHDPLVEWTKSHKSSGVEVQNPHAQLAISNIEARLRGVVVGVGAAPSLPLAVEGQARRLIAEAVAHKNLGKMLFQHSLPVALGSSANLAKFLGGQILGKLRPFFNECKASAVHDLSKQALLLLPSKLQGPMQLLLYVLAHVATYLTTSVVFGSIVDHIREEALKGWFCAKSLKCFEGSSLK* | 2823 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 1127537 | 1141655 | + | CsaV3_7G001280.1 | Csa07g00128 | 535691 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Csa07g00128 | 2822 | MobiDBLite | consensus disorder prediction | 1413 | 1440 | - | - | |
| Csa07g00128 | 2822 | Pfam | Phosphatidylinositol 3- and 4-kinase | 2405 | 2650 | IPR000403 | - | |
| Csa07g00128 | 2822 | Gene3D | Tetratricopeptide repeat domain | 1735 | 2123 | IPR011990 | GO:0005515 | |
| Csa07g00128 | 2822 | MobiDBLite | consensus disorder prediction | 1413 | 1427 | - | - | |
| Csa07g00128 | 2822 | PANTHER | SERINE/THREONINE-PROTEIN KINASE ATR | 57 | 2713 | - | - | |
| Csa07g00128 | 2822 | Gene3D | - | 2342 | 2462 | - | - | |
| Csa07g00128 | 2822 | Gene3D | - | 848 | 1271 | IPR011989 | - | |
| Csa07g00128 | 2822 | ProSiteProfiles | FAT domain profile. | 1654 | 2267 | IPR014009 | - | |
| Csa07g00128 | 2822 | SUPERFAMILY | Protein kinase-like (PK-like) | 2307 | 2653 | IPR011009 | - | |
| Csa07g00128 | 2822 | CDD | PIKKc_ATR | 2375 | 2651 | - | - | |
| Csa07g00128 | 2822 | Gene3D | - | 2518 | 2677 | IPR036940 | GO:0016301 | |
| Csa07g00128 | 2822 | ProSiteProfiles | Phosphatidylinositol 3- and 4-kinases catalytic domain profile. | 2378 | 2691 | IPR000403 | - | |
| Csa07g00128 | 2822 | PANTHER | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED | 57 | 2713 | - | - | |
| Csa07g00128 | 2822 | Pfam | UME (NUC010) domain | 1098 | 1198 | IPR012993 | GO:0004674 | |
| Csa07g00128 | 2822 | SMART | UME_cls | 1095 | 1201 | IPR012993 | GO:0004674 | |
| Csa07g00128 | 2822 | SMART | pi3k_hr1_6 | 2405 | 2710 | IPR000403 | - | |
| Csa07g00128 | 2822 | ProSitePatterns | Phosphatidylinositol 3- and 4-kinases signature 2. | 2544 | 2564 | IPR018936 | GO:0016301 | |
| Csa07g00128 | 2822 | Pfam | FAT domain | 1799 | 2177 | IPR003151 | GO:0005515 | |
| Csa07g00128 | 2822 | SUPERFAMILY | ARM repeat | 301 | 1355 | IPR016024 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Csa07g00128 | K06640 | ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1] | - | csv:101212807 | 5354.26 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Csa01g00147 | Csa-Chr1:890185 | Csa07g00128 | Csa-Chr7:1127537 | 2.07E-78 | dispersed | |
| Csa06g03323 | Csa-Chr6:27781130 | Csa07g00128 | Csa-Chr7:1127537 | 1.90E-15 | dispersed | |
| Csa07g00128 | Csa-Chr7:1127537 | Csa07g00668 | Csa-Chr7:4752118 | 1.26E-08 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi3g215 | . | . | . | . | . | Bpe12g00133 | . | . | . | . | . | . | . | . | Sed04g3826 | Cpe04g00609 | . | Bhi05g01671 | Tan02g0643 | Cmetu01g0717 | . | Hepe02g0401 | . | . | Cla02g00402 | Cam02g0407 | Cec02g0407 | Cco02g0423 | Clacu02g0410 | Cmu02g0406 | Cre02g0741 | . | . | . | . | . | Csa07g00128 | . | Cme01g01220 | . | Blo13g00493 | . | . | . | . | . | Bma08g00743 | . | . | . | Cma11g01361 | . | Car11g01387 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi11g01223 | . | Chy01g00655 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0012534 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 29 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Csa07g00128 | Csa_Chr07 | FPKM | 4.494361 | 5.169452 | 90.043716 | 88.776489 | 1581.805298 | 1734.635376 | 1407.923218 | 5.744144 | 3.2155 | 2.950668 | |
| Csa07g00128 | Csa_Chr07 | FPKM | 3.733709 | 4.686183 | 83.800781 | 83.221329 | 1532.032104 | 1717.186035 | 1369.07019 | 6.292493 | 3.383924 | 3.304636 |