Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00198 ATGGAAGGGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTATGGTCTATGTGCTGTTGGAGGAATGCTCAGTGCTGGGACTACTCATCTTGCTATTACACCTCTTGATGTCTTGAAGGTTAATATGCAGGTTAATCCAATCAAGTACAGTGGCATTTCTTCTGGTTTTTCTATTCTTTGGAGGGAACAGGGTCCTTCATCCCTTTGGAGAGGTTGGTCGGGCAAGTTATTTGGGTATGGAGTTCAAGGCGGCTTCAAATTCGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTGCTGGAAGGCCACAGTAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCCGACATTGCTCTCTGTCCTTTTGAGGCTGTCAAGGTCAGAGTCCAGGCACAACCCTATTATGCCAAGGGGTTGGCTGATGGGTTCCCAAAGTTATACTACAGTGAAGGTCTTTCGGGTTTCTACAGAGGCCTTTTTCCACTTTGGGGACGGAATCTTCCATTCTCCATGATAATGTTCTCAACATTTGAGCATTCAGTGAACTTCATATATCAGAATATCATTAAGCGCAGAAAGGAAGATTGCTCAAGAACCCAACAGCTTGGTGTTACATGTTTAGCTGGCTATACAGCTGGAGCTGTTGGTACTTTTGTCTCAAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAGAAGGCTGATAATGTGCTGCAGGCAGTGAAGAAGATAGGATTTGGAAATCTATTTATTAGAAGCCTTCCTGTCAGAATTACAATTGTTGGTCCTCTTGTTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTGCTAAGTGGACTGCCTACAAGTGGAGGGATCAACAACAAAAAATTGGAAGAAGCAAAACTATCAACTTAG 933 42.23 MEGVEGRRVCQEFSAGYYGLCAVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYSGISSGFSILWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGHSRSSIYFLSSASAQVFADIALCPFEAVKVRVQAQPYYAKGLADGFPKLYYSEGLSGFYRGLFPLWGRNLPFSMIMFSTFEHSVNFIYQNIIKRRKEDCSRTQQLGVTCLAGYTAGAVGTFVSNPADNIVSSLYNKKADNVLQAVKKIGFGNLFIRSLPVRITIVGPLVTLQWFFYDTIKVLSGLPTSGGINNKKLEEAKLST* 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1604053 1610763 + CsaV3_7G001980.1 Csa07g00198 535761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00198 310 Pfam Mitochondrial carrier protein 114 196 IPR018108 -
Csa07g00198 310 Pfam Mitochondrial carrier protein 23 102 IPR018108 -
Csa07g00198 310 SUPERFAMILY Mitochondrial carrier 20 285 IPR023395 -
Csa07g00198 310 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 304 IPR044677 GO:0005315|GO:1990547
Csa07g00198 310 PANTHER MITOCHONDRIAL PHOSPHATE CARRIER PROTEIN 1, MITOCHONDRIAL 6 304 - -
Csa07g00198 310 Gene3D Mitochondrial carrier domain 21 289 IPR023395 -
Csa07g00198 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Csa07g00198 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 193 IPR018108 -
Csa07g00198 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 289 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa05g01668 Csa-Chr5:19816552 Csa07g00198 Csa-Chr7:1604053 8.59E-106 dispersed
Csa07g00198 Csa-Chr7:1604053 Csa06g01392 Csa-Chr6:11913493 3.37E-18 dispersed
Csa07g00198 Csa-Chr7:1604053 Csa03g03076 Csa-Chr3:28937338 1.59E-16 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00198 K15102 - csv:101219895 630.557