Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00232 ATGAAACTCTCAACACTTTCTTCTTCCATTCTTCTTCTTTCATTTCTTCTCCTTTCTTCTTCACTATTCACTCCCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCATTCCCACGGCGGTCAAAAACCGGCCGATGTCGTCGCCAATTCTCACCACGAATTCCTCCAACCATTTCTCAAAAGTGGAGAAGAGTTTACAAAGGATGTGATATTTTACTCATATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTAGCTGTTCAATTAGCCAAGCATCCGAAAGTGGTATCGGTTTTTCTAAATAGAGGAAGAAAATTACACACAACAAGATCGTGGGAATTTATGGGATTAGAGAACAAGAATGGAGTTATCAACTCAGAATCAATATGGAAGAAAGCAAGATTTGGAGAGGACACCATTATCGGAAACCTTGATACTGGGGTGTGGGCAGAATCAAAGAGCTTTAGTGATGATGAATATGGACCAATTCCTCATAGGTGGAAAGGAATCTGCCAAAACCAAAAGGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGCATCCGTTGTCGGCCCTCTCAATTCCTCATTCCATTCGCCGAGGGACAAAGAAGGCCATGGCTCTCATACCTTGTCCACGGCCGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTAGGTAAGGGCACCGCCAAGGGCGGATCACCTAGGGCTCGGGTGGCCGCTTACAAGGTCTGCTGGCCTCCGAAGGCTGGAAATGAGTGCTTCGATGCTGATATATTGGCCGCGTTTGATTTTGCGATTCACGACGGTGTCGATGTGTTGTCGGTGTCGCTTGGAGGAGATCCGAATCCGTTGTTTAACGATAGTGTAGCTATTGGCTCATTCCACGCCATCAAGCATGGGATTGTCGTGATTTGCTCTGCTGGAAATTCGGGACCGGCAGCCGGTACGGTGACCAATGTTGCGCCCTGGCAGATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTAGTTGTTCTTGGGAACAGGAAGCAGATTGAGGGTGAAAGCCTGTCCCAGGATGCTTTGCCAAGCAAGAAGCTCTATCCACTCATGAATGCTGCAGATGTTAGATTAGCCAATGCATCAGTTCATGAAGCTCAATTGTGTAAAGCTGGTACACTTAACCCTATGAAAGCTAAGGGAAAGATCCTTGTCTGCCTTCGAGGTGATAATGCAAGAGTCGACAAAGGCGAACAAGCATTGTTGGCTGGTGCTGCGGGCATGATTCTTGCTAACAATGAGCTAAGTGGGAATGAAATCCTTGCTGACCCACATGTCCTTCCAGCCTCGCACATAAACTTCACCGATGGCAGTGCGGTCTTTGCATACATCAATTCAACTAAGTACCCCGAGGCTTACATCACACCAGCTACAACTCAATTAGGAATAAGGCCAGCTCCATTCATGGCAGCATTTTCATCGGTGGGACCAAACACTGTTACTCCAGAGATCCTGAAGCCTGATATTACAGCTCCTGGACTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGACCTACGAACCAAGAATTTGATAATCGTCGGATTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAAGACTCTTTACCCTCATTGGAGTCCTGCAGCTATCAAATCTGCCATCATGACCACGGCAAGCATTTTAGACAATAACTTCGAGCCGCTCCTCAATGCGTCCTACTCAGTGGCCTCACCATTCAACTATGGAGCAGGACATGTTCATCCAAATGGTGCTGCAGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAATATCTGTCATTTCTATGTGCATTAGGATATAACAAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGACCCTATTAGTCCTACAAATCTTAACTACCCTTCGATAACTGTCCCTAAGCTCTCAAGATCAATCACAATTACTCGAAGACTAAAGAATGTCGGTTCTCCTGGAACATACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGAAGTTGAGCTTCACAAGATTAGGGGAAGAGCTGAGCTTCAAAGTTCTTATGAAAGTCAAGGAACGTAAAGTAGCAAAGAAGAATTATGTATATGGTGATTTGATATGGTCGGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAAGTAGTCTAG 2319 45.49 MKLSTLSSSILLLSFLLLSSSLFTPTSAIKRSYVVYMGAHSHGGQKPADVVANSHHEFLQPFLKSGEEFTKDVIFYSYTRHINGFAAMLEDEVAVQLAKHPKVVSVFLNRGRKLHTTRSWEFMGLENKNGVINSESIWKKARFGEDTIIGNLDTGVWAESKSFSDDEYGPIPHRWKGICQNQKDPSFHCNRKLIGARYFNKGYASVVGPLNSSFHSPRDKEGHGSHTLSTAGGNFVAGASVFGLGKGTAKGGSPRARVAAYKVCWPPKAGNECFDADILAAFDFAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAIKHGIVVICSAGNSGPAAGTVTNVAPWQITVGASTMDRKFPSLVVLGNRKQIEGESLSQDALPSKKLYPLMNAADVRLANASVHEAQLCKAGTLNPMKAKGKILVCLRGDNARVDKGEQALLAGAAGMILANNELSGNEILADPHVLPASHINFTDGSAVFAYINSTKYPEAYITPATTQLGIRPAPFMAAFSSVGPNTVTPEILKPDITAPGLSVIAAYTEAEGPTNQEFDNRRIPFNSVSGTSMSCPHVSGIAGLLKTLYPHWSPAAIKSAIMTTASILDNNFEPLLNASYSVASPFNYGAGHVHPNGAADPGLVYDIEVNEYLSFLCALGYNKAQISQFSNGPFNCSDPISPTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKKLSFTRLGEELSFKVLMKVKERKVAKKNYVYGDLIWSDGKHHVRSPIVVKVV* 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1828536 1837166 - CsaV3_7G002320.1 Csa07g00232 535795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00232 772 CDD PA_subtilisin_like 360 490 - -
Csa07g00232 772 SUPERFAMILY Subtilisin-like 115 632 IPR036852 GO:0004252|GO:0006508
Csa07g00232 772 Pfam Fibronectin type-III domain 673 769 IPR041469 -
Csa07g00232 772 CDD Peptidases_S8_3 113 595 IPR034197 -
Csa07g00232 772 SUPERFAMILY PA domain 412 499 IPR046450 -
Csa07g00232 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Csa07g00232 772 Gene3D - 645 772 - -
Csa07g00232 772 ProSiteProfiles Serine proteases, subtilase domain profile. 119 628 - -
Csa07g00232 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 115 IPR037045 -
Csa07g00232 772 Gene3D - 353 497 - -
Csa07g00232 772 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Csa07g00232 772 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Csa07g00232 772 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Csa07g00232 772 Pfam Peptidase inhibitor I9 32 115 IPR010259 -
Csa07g00232 772 PANTHER PEPTIDASE S8 18 771 - -
Csa07g00232 772 Pfam PA domain 403 475 IPR003137 -
Csa07g00232 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 18 771 - -
Csa07g00232 772 Gene3D Peptidase S8/S53 domain 146 641 IPR036852 GO:0004252|GO:0006508
Csa07g00232 772 Pfam Subtilase family 144 606 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01525 Csa-Chr1:10916683 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa01g01526 Csa-Chr1:10921883 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa03g00396 Csa-Chr3:3323657 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa06g03738 Csa-Chr6:29827158 Csa07g00232 Csa-Chr7:1828536 0 dispersed
Csa07g00232 Csa-Chr7:1828536 Csa02g01383 Csa-Chr2:13262617 0 dispersed
Csa07g00232 Csa-Chr7:1828536 Csa02g01905 Csa-Chr2:18004320 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00232 - - csv:101212884 1519.21