Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00232 | ATGAAACTCTCAACACTTTCTTCTTCCATTCTTCTTCTTTCATTTCTTCTCCTTTCTTCTTCACTATTCACTCCCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCATTCCCACGGCGGTCAAAAACCGGCCGATGTCGTCGCCAATTCTCACCACGAATTCCTCCAACCATTTCTCAAAAGTGGAGAAGAGTTTACAAAGGATGTGATATTTTACTCATATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTAGCTGTTCAATTAGCCAAGCATCCGAAAGTGGTATCGGTTTTTCTAAATAGAGGAAGAAAATTACACACAACAAGATCGTGGGAATTTATGGGATTAGAGAACAAGAATGGAGTTATCAACTCAGAATCAATATGGAAGAAAGCAAGATTTGGAGAGGACACCATTATCGGAAACCTTGATACTGGGGTGTGGGCAGAATCAAAGAGCTTTAGTGATGATGAATATGGACCAATTCCTCATAGGTGGAAAGGAATCTGCCAAAACCAAAAGGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGCATCCGTTGTCGGCCCTCTCAATTCCTCATTCCATTCGCCGAGGGACAAAGAAGGCCATGGCTCTCATACCTTGTCCACGGCCGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTAGGTAAGGGCACCGCCAAGGGCGGATCACCTAGGGCTCGGGTGGCCGCTTACAAGGTCTGCTGGCCTCCGAAGGCTGGAAATGAGTGCTTCGATGCTGATATATTGGCCGCGTTTGATTTTGCGATTCACGACGGTGTCGATGTGTTGTCGGTGTCGCTTGGAGGAGATCCGAATCCGTTGTTTAACGATAGTGTAGCTATTGGCTCATTCCACGCCATCAAGCATGGGATTGTCGTGATTTGCTCTGCTGGAAATTCGGGACCGGCAGCCGGTACGGTGACCAATGTTGCGCCCTGGCAGATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTAGTTGTTCTTGGGAACAGGAAGCAGATTGAGGGTGAAAGCCTGTCCCAGGATGCTTTGCCAAGCAAGAAGCTCTATCCACTCATGAATGCTGCAGATGTTAGATTAGCCAATGCATCAGTTCATGAAGCTCAATTGTGTAAAGCTGGTACACTTAACCCTATGAAAGCTAAGGGAAAGATCCTTGTCTGCCTTCGAGGTGATAATGCAAGAGTCGACAAAGGCGAACAAGCATTGTTGGCTGGTGCTGCGGGCATGATTCTTGCTAACAATGAGCTAAGTGGGAATGAAATCCTTGCTGACCCACATGTCCTTCCAGCCTCGCACATAAACTTCACCGATGGCAGTGCGGTCTTTGCATACATCAATTCAACTAAGTACCCCGAGGCTTACATCACACCAGCTACAACTCAATTAGGAATAAGGCCAGCTCCATTCATGGCAGCATTTTCATCGGTGGGACCAAACACTGTTACTCCAGAGATCCTGAAGCCTGATATTACAGCTCCTGGACTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGACCTACGAACCAAGAATTTGATAATCGTCGGATTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAAGACTCTTTACCCTCATTGGAGTCCTGCAGCTATCAAATCTGCCATCATGACCACGGCAAGCATTTTAGACAATAACTTCGAGCCGCTCCTCAATGCGTCCTACTCAGTGGCCTCACCATTCAACTATGGAGCAGGACATGTTCATCCAAATGGTGCTGCAGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAATATCTGTCATTTCTATGTGCATTAGGATATAACAAAGCTCAAATATCACAATTCTCCAATGGTCCCTTCAATTGCTCGGACCCTATTAGTCCTACAAATCTTAACTACCCTTCGATAACTGTCCCTAAGCTCTCAAGATCAATCACAATTACTCGAAGACTAAAGAATGTCGGTTCTCCTGGAACATACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGAAGTTGAGCTTCACAAGATTAGGGGAAGAGCTGAGCTTCAAAGTTCTTATGAAAGTCAAGGAACGTAAAGTAGCAAAGAAGAATTATGTATATGGTGATTTGATATGGTCGGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAAGTAGTCTAG | 2319 | 45.49 | MKLSTLSSSILLLSFLLLSSSLFTPTSAIKRSYVVYMGAHSHGGQKPADVVANSHHEFLQPFLKSGEEFTKDVIFYSYTRHINGFAAMLEDEVAVQLAKHPKVVSVFLNRGRKLHTTRSWEFMGLENKNGVINSESIWKKARFGEDTIIGNLDTGVWAESKSFSDDEYGPIPHRWKGICQNQKDPSFHCNRKLIGARYFNKGYASVVGPLNSSFHSPRDKEGHGSHTLSTAGGNFVAGASVFGLGKGTAKGGSPRARVAAYKVCWPPKAGNECFDADILAAFDFAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAIKHGIVVICSAGNSGPAAGTVTNVAPWQITVGASTMDRKFPSLVVLGNRKQIEGESLSQDALPSKKLYPLMNAADVRLANASVHEAQLCKAGTLNPMKAKGKILVCLRGDNARVDKGEQALLAGAAGMILANNELSGNEILADPHVLPASHINFTDGSAVFAYINSTKYPEAYITPATTQLGIRPAPFMAAFSSVGPNTVTPEILKPDITAPGLSVIAAYTEAEGPTNQEFDNRRIPFNSVSGTSMSCPHVSGIAGLLKTLYPHWSPAAIKSAIMTTASILDNNFEPLLNASYSVASPFNYGAGHVHPNGAADPGLVYDIEVNEYLSFLCALGYNKAQISQFSNGPFNCSDPISPTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKKLSFTRLGEELSFKVLMKVKERKVAKKNYVYGDLIWSDGKHHVRSPIVVKVV* | 773 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 1828536 | 1837166 | - | CsaV3_7G002320.1 | Csa07g00232 | 535795 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00232 | 772 | CDD | PA_subtilisin_like | 360 | 490 | - | - | |
Csa07g00232 | 772 | SUPERFAMILY | Subtilisin-like | 115 | 632 | IPR036852 | GO:0004252|GO:0006508 | |
Csa07g00232 | 772 | Pfam | Fibronectin type-III domain | 673 | 769 | IPR041469 | - | |
Csa07g00232 | 772 | CDD | Peptidases_S8_3 | 113 | 595 | IPR034197 | - | |
Csa07g00232 | 772 | SUPERFAMILY | PA domain | 412 | 499 | IPR046450 | - | |
Csa07g00232 | 772 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 559 | 569 | IPR023828 | - | |
Csa07g00232 | 772 | Gene3D | - | 645 | 772 | - | - | |
Csa07g00232 | 772 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 119 | 628 | - | - | |
Csa07g00232 | 772 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 19 | 115 | IPR037045 | - | |
Csa07g00232 | 772 | Gene3D | - | 353 | 497 | - | - | |
Csa07g00232 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 144 | 163 | IPR015500 | - | |
Csa07g00232 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 219 | 232 | IPR015500 | - | |
Csa07g00232 | 772 | PRINTS | Subtilisin serine protease family (S8) signature | 558 | 574 | IPR015500 | - | |
Csa07g00232 | 772 | Pfam | Peptidase inhibitor I9 | 32 | 115 | IPR010259 | - | |
Csa07g00232 | 772 | PANTHER | PEPTIDASE S8 | 18 | 771 | - | - | |
Csa07g00232 | 772 | Pfam | PA domain | 403 | 475 | IPR003137 | - | |
Csa07g00232 | 772 | PANTHER | SUBTILISIN-LIKE PROTEASE SBT5.4 | 18 | 771 | - | - | |
Csa07g00232 | 772 | Gene3D | Peptidase S8/S53 domain | 146 | 641 | IPR036852 | GO:0004252|GO:0006508 | |
Csa07g00232 | 772 | Pfam | Subtilase family | 144 | 606 | IPR000209 | GO:0006508|GO:0008236 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01525 | Csa-Chr1:10916683 | Csa07g00232 | Csa-Chr7:1828536 | 0 | dispersed | |
Csa01g01526 | Csa-Chr1:10921883 | Csa07g00232 | Csa-Chr7:1828536 | 0 | dispersed | |
Csa03g00396 | Csa-Chr3:3323657 | Csa07g00232 | Csa-Chr7:1828536 | 0 | dispersed | |
Csa06g03738 | Csa-Chr6:29827158 | Csa07g00232 | Csa-Chr7:1828536 | 0 | dispersed | |
Csa07g00232 | Csa-Chr7:1828536 | Csa02g01383 | Csa-Chr2:13262617 | 0 | dispersed | |
Csa07g00232 | Csa-Chr7:1828536 | Csa02g01905 | Csa-Chr2:18004320 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00232 | - | - | csv:101212884 | 1519.21 |