Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00329 | ATGGCACAGTTACCACCTAAGATCCCCAATATGGCTTCTAATTGGTCTGAATTATCCCGTCAGAAAATCCCCTCCATGGAAACTTTTGCACCTACCACCACTACACCACCGGTTACTCAACAGAATCCTTCTTGGGTTGATGAATTTCTTGATTTCTCTTCCGTTAGACGTGGATCACATCGTCGGTCTGTTAGTGATTCCATCACATTTCTTGAAATGCCAATGCTGGAGGATGATTGTCGTGCCTCCGCTGCACCCCCACCACCGTCCACGGCAACCGGTGACCAGAATGAATTTGATAGATTTGATGACGAGCAATTCCTCTCGATGTTTAATGACGAAATCTCCGCTGCTGTTGCACCAACTTTGTCGTCGTCGAACCCTTCCACGCCGTCTGATCATAACAGTATTAACGATGAGAAAGATGCGCAAAACGATGGGAAGGTAAATCAGAATAAAAATGAGCCCGACGAAGTACAGAGCCAACAGCAATCGGAAAATCAAACTCAATCCAATTCAACGGCGACGGCGGGTTCCACTGATCGGATAACAGACCCAAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCACAAAGATCACGAGTGAGGAAGCTTCAATACATATCAGAACTTGAACGAAGCGTTACATCATTACAGGCTGAAGTATCGGTATTGTCGCCGCGAGTGGCGTTTTTGGACCATCAGAGATTGCTTCTTAACGTCGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCTCAGGATAAGATTTTTAAAGATGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCAACAAAACATCAAGAAAATGGAAAATGCATCACCATCACCAGCAATTACTCCATCTCAACCTGTCGCCACCACCGTCCCTGATGCCAAACTTCCAAACGTAGATCAAAACGAGCAAGTTCCAAATGTCATGGTTTAG | 981 | 45.06 | MAQLPPKIPNMASNWSELSRQKIPSMETFAPTTTTPPVTQQNPSWVDEFLDFSSVRRGSHRRSVSDSITFLEMPMLEDDCRASAAPPPPSTATGDQNEFDRFDDEQFLSMFNDEISAAVAPTLSSSNPSTPSDHNSINDEKDAQNDGKVNQNKNEPDEVQSQQQSENQTQSNSTATAGSTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV* | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2441338 | 2445938 | + | CsaV3_7G003290.1 | Csa07g00329 | 535892 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00329 | 326 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 185 | 237 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00329 | 326 | Coils | Coil | 266 | 286 | - | - | |
Csa07g00329 | 326 | PANTHER | BZIP FAMILY TRANSCRIPTION FACTOR | 1 | 303 | - | - | |
Csa07g00329 | 326 | MobiDBLite | consensus disorder prediction | 154 | 181 | - | - | |
Csa07g00329 | 326 | MobiDBLite | consensus disorder prediction | 121 | 189 | - | - | |
Csa07g00329 | 326 | Gene3D | - | 186 | 257 | - | - | |
Csa07g00329 | 326 | MobiDBLite | consensus disorder prediction | 135 | 153 | - | - | |
Csa07g00329 | 326 | MobiDBLite | consensus disorder prediction | 287 | 326 | - | - | |
Csa07g00329 | 326 | MobiDBLite | consensus disorder prediction | 79 | 107 | - | - | |
Csa07g00329 | 326 | SUPERFAMILY | Leucine zipper domain | 187 | 241 | IPR046347 | GO:0003700|GO:0006355 | |
Csa07g00329 | 326 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 190 | 205 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00329 | 326 | PANTHER | BASIC LEUCINE ZIPPER 34 | 1 | 303 | - | - | |
Csa07g00329 | 326 | SMART | brlzneu | 183 | 247 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00329 | 326 | Pfam | bZIP transcription factor | 187 | 230 | IPR004827 | GO:0003700|GO:0006355 | |
Csa07g00329 | 326 | CDD | bZIP_plant_RF2 | 188 | 238 | IPR044759 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g00329 | Csa-Chr7:2441338 | Csa05g00893 | Csa-Chr5:6934222 | 7.91E-22 | dispersed | |
Csa03g01927 | Csa-Chr3:15075658 | Csa07g00329 | Csa-Chr7:2441338 | 9.00E-29 | transposed | |
Csa04g02307 | Csa-Chr4:23609265 | Csa07g00329 | Csa-Chr7:2441338 | 7.60E-105 | transposed | |
Csa05g02176 | Csa-Chr5:24730809 | Csa07g00329 | Csa-Chr7:2441338 | 7.74E-28 | transposed | |
Csa02g02641 | Csa-Chr2:22991331 | Csa07g00329 | Csa-Chr7:2441338 | 9.83E-86 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
32253 | PF07716 | bZIP_2 | 3.50E-09 | CL0018 | Csa | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00329 | - | - | csv:101205276 | 600.897 |