Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00367 | ATGCCACAAAGCTTAAATTTTTCATGGAAAACTCTAATTGCAGTGGCTTCTTGGGCTCCGTTCAAGGTACTTGAGAAAGAGATTGTAGCCATGATTGGCCCACAATCCTCAGTAGTGGCTCATGTGATTTCTCAGATTGTTAATGGTCTACAAATTCCTCTAGTATCTTATGCTGCCACTGATCCAACATTATCCACTTTACAACTCCCTTTTTTTCTCAGAACCACTATAAGCGACTCTTACCAAATGGCTGCCATGGCTGACTTGATTGATTACTATGGCTGGAAAGAAGTCATTGTTATATTTTTGGATGATGATTATGGTAGAAATGGGATATCTTTTCTGGGTGATGAACTTCAGAAGAAAATGTGCCGTATTTCCCATGCATTCCCTTTACCTTCTCTGGATAATCTTTCTAAGATCACACAAATACTCAACAATTCTAAATTACTTGGTCCTCGAGTTTATGTAGTTCATGTAGGCCCTGATCCCCAATTAAGAATCTTCACTATTGCCCATAAACTCGGTATGCTTTCAAGCAATTATGTTTGGTTCGCAACTGATTGGCTTTCCACAACTCTTGATTCTTCTTCACCAATAACCAATGGTGCTTCACTTGATATGCTTAATGGAGTTGTTGGGTTGCGCCCTCATACTCCAGAGTCTAAAGGAAAGAGAGATTTGTGGGATCGGTTAAGGAAAATGCAGCCAAAAGGTTTAACTAATTCTGCGTTGAATGTTTATGGACTTTATGCTTATGATTCAGTATGGGTTGTTGCAAAGGCAGTGGATAAGTTTCTTAAAGAAAATGGGAATATCATTACATTTTCACCCACAGGTAAAGTGTTGGGCTCTAATGAAAGTGGAATTCAATTGGGTAATGTTAAAGTGTTTGATAGAGGGAGTGATTTACTTAAAATTCTTATGCAAACTGATTACAATGGTTTAAGTGGGAGAATTCAGTTTGGTGAAGACAGAAGTGTTGTTAATGGTAGCTATGATGTGATTAATATTAACCAAAGGAAAATGAATTTGGTGGGTCATTGGTCTAATGACTTAAGATTTCATCCTAACTTAGATCAGAAACTTGAGAAAGTGGTTTGGCCTGGTGGGAAGGAGGAGATACCAAGGGGATGGGTGATAGCAGATAGTGGAAAACCTTTGAGAATTGCTTTCCCAAGAAGAGCAAGCTTTGTTGATTTTGTAACTCAATTGAACAACACCAATATTGTTCGAGGATATGTTATTGATATTTTCAAAGAAGCTCTCAAGTTTGTTCCATATGAAGTTCCTTACAAGTTTGTGCCTTTTGGAGATGGTAAAGTTAATCCCAGTTATGATGAACTTGTTCAATCGGTTGCAAATAATGTGTTTGATGCAGCAGTTGGGGACATTGCAATCGTTACGAACCGAACCAAAGTTGTTGATTTTTCTCAACCATATACCACAACAGGGCTGATCATAGTTGCACCAGTTGAAGATTCAAAATCAAGTGCTTGGGTGTTCCTTAAACCATTTACAGTAGAGATGTGGTGTGCAACTGCAGGTTCCTTTGTGGTAATTGGTATTGTTATTTGGATGTTAGAGCATAGAATCAACGACCATTTTCGAGGTCCTCCGAAAAGACAGATTATCACAATGTGTTTGTTTAGCATTTCAACTCTTTTCAAGGCAAATCAAGAAGCAACAATAAGTCCACTCTCACGACTAGTGATGTTGGTTTGGCTGTTCTTATTATTGGTAATAACCTCAAGCTACACAGCAAGTTTGACATCAATCCTTACACTCCAACAACTTTGGTCTCCAATACGAGGAATTGATGACTTGGTTGCAAGTAATTTGCCAATTGGATATCAAGTAGGATCCTTTGCTTACGACTATCTCACACAAAGCCTTTTCATTCCAAGTTCAAGACTGCAGAGGCTGAACTCCTCTGAAGACTACGAGAAAGCACTGCGTCTTGGCCCAAAAGGAGGCGGCGTGGCGGCCATCATCGATGAACTTCCATACTTGGAGTTGTTTCTGTCAAAGACTAAAGAATTTGGAATCATTGGTCAACCTTTTACTAGGAGCGGATGGGGATTTGCTTTTCAACGAGGATCTCGACTTGCAGTCGATATGTCAACTGCAATTCTGAAGCTCTCGGAGAGCGGAAAGCTGCAAGAAATACACGACTCATGGTTCTGCAAGCTAGGTTGTCCAGGTAATCGGGGAGGAAAGTCAGAGCCAGACCAACTTCACTTGATCAGTTTCTGGGGTTTGTATTTGCTTTGTGGAATCATTTCCGTCGCTGCACTCTTCCTGTTTCTTTTAAGACTAATCCGCCAGTATATCCGTTACATACGACATCATCGACGACGTCATTCAGAAGAAGTTACACCATTCCCAGTTCCATCCAACACTAGCTGTACTCAGAGGATTCAAAACTTTATAAACTTTATTGATGAGAAAGAAGAAGCTATCAAAAGCTTCTTTGGAGCATCACATGGTGCTCAAAATGGGAACCAACTTCACAATCATTCCCAAAAAGCCAAGGAGAAGGCTGATTCAGAGATACAGATAGGGCCCACGACCATGGGTATGAATCGAGGATAG | 2595 | 40.08 | MPQSLNFSWKTLIAVASWAPFKVLEKEIVAMIGPQSSVVAHVISQIVNGLQIPLVSYAATDPTLSTLQLPFFLRTTISDSYQMAAMADLIDYYGWKEVIVIFLDDDYGRNGISFLGDELQKKMCRISHAFPLPSLDNLSKITQILNNSKLLGPRVYVVHVGPDPQLRIFTIAHKLGMLSSNYVWFATDWLSTTLDSSSPITNGASLDMLNGVVGLRPHTPESKGKRDLWDRLRKMQPKGLTNSALNVYGLYAYDSVWVVAKAVDKFLKENGNIITFSPTGKVLGSNESGIQLGNVKVFDRGSDLLKILMQTDYNGLSGRIQFGEDRSVVNGSYDVININQRKMNLVGHWSNDLRFHPNLDQKLEKVVWPGGKEEIPRGWVIADSGKPLRIAFPRRASFVDFVTQLNNTNIVRGYVIDIFKEALKFVPYEVPYKFVPFGDGKVNPSYDELVQSVANNVFDAAVGDIAIVTNRTKVVDFSQPYTTTGLIIVAPVEDSKSSAWVFLKPFTVEMWCATAGSFVVIGIVIWMLEHRINDHFRGPPKRQIITMCLFSISTLFKANQEATISPLSRLVMLVWLFLLLVITSSYTASLTSILTLQQLWSPIRGIDDLVASNLPIGYQVGSFAYDYLTQSLFIPSSRLQRLNSSEDYEKALRLGPKGGGVAAIIDELPYLELFLSKTKEFGIIGQPFTRSGWGFAFQRGSRLAVDMSTAILKLSESGKLQEIHDSWFCKLGCPGNRGGKSEPDQLHLISFWGLYLLCGIISVAALFLFLLRLIRQYIRYIRHHRRRHSEEVTPFPVPSNTSCTQRIQNFINFIDEKEEAIKSFFGASHGAQNGNQLHNHSQKAKEKADSEIQIGPTTMGMNRG* | 865 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2736621 | 2742426 | + | CsaV3_7G003670.1 | Csa07g00367 | 535930 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00367 | 864 | Gene3D | - | 78 | 351 | - | - | |
Csa07g00367 | 864 | PANTHER | IONOTROPIC GLUTAMATE RECEPTOR | 16 | 833 | - | - | |
Csa07g00367 | 864 | Gene3D | - | 21 | 330 | - | - | |
Csa07g00367 | 864 | Gene3D | - | 499 | 631 | - | - | |
Csa07g00367 | 864 | PANTHER | GLUTAMATE RECEPTOR 3.7 | 16 | 833 | - | - | |
Csa07g00367 | 864 | Pfam | Ligand-gated ion channel | 729 | 760 | IPR001320 | GO:0015276|GO:0016020 | |
Csa07g00367 | 864 | Gene3D | - | 677 | 735 | - | - | |
Csa07g00367 | 864 | Pfam | Receptor family ligand binding region | 25 | 339 | IPR001828 | - | |
Csa07g00367 | 864 | SMART | GluR_14 | 389 | 730 | IPR001320 | GO:0015276|GO:0016020 | |
Csa07g00367 | 864 | MobiDBLite | consensus disorder prediction | 835 | 864 | - | - | |
Csa07g00367 | 864 | SUPERFAMILY | Periplasmic binding protein-like I | 23 | 380 | IPR028082 | - | |
Csa07g00367 | 864 | PIRSF | IGluLR_plant | 5 | 858 | IPR017103 | - | |
Csa07g00367 | 864 | Pfam | Bacterial extracellular solute-binding proteins, family 3 | 407 | 728 | IPR001638 | - | |
Csa07g00367 | 864 | Coils | Coil | 861 | 864 | - | - | |
Csa07g00367 | 864 | Gene3D | - | 381 | 498 | - | - | |
Csa07g00367 | 864 | PRINTS | Metabotropic glutamate GPCR signature | 31 | 57 | IPR000337 | GO:0004930|GO:0007186|GO:0016021 | |
Csa07g00367 | 864 | PRINTS | Metabotropic glutamate GPCR signature | 63 | 82 | IPR000337 | GO:0004930|GO:0007186|GO:0016021 | |
Csa07g00367 | 864 | PRINTS | Metabotropic glutamate GPCR signature | 82 | 98 | IPR000337 | GO:0004930|GO:0007186|GO:0016021 | |
Csa07g00367 | 864 | PRINTS | Metabotropic glutamate GPCR signature | 98 | 115 | IPR000337 | GO:0004930|GO:0007186|GO:0016021 | |
Csa07g00367 | 864 | CDD | GluR_Plant | 386 | 728 | - | - | |
Csa07g00367 | 864 | SUPERFAMILY | Periplasmic binding protein-like II | 374 | 728 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g02721 | Csa-Chr4:26244040 | Csa07g00367 | Csa-Chr7:2736621 | 0 | dispersed | |
Csa06g03402 | Csa-Chr6:28181168 | Csa07g00367 | Csa-Chr7:2736621 | 0 | dispersed | |
Csa07g00194 | Csa-Chr7:1584463 | Csa07g00367 | Csa-Chr7:2736621 | 4.87E-151 | dispersed | |
Csa07g00367 | Csa-Chr7:2736621 | Csa06g01991 | Csa-Chr6:17912287 | 5.03E-149 | dispersed | |
Csa02g02681 | Csa-Chr2:23361035 | Csa07g00367 | Csa-Chr7:2736621 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00367 | K05387 | - | csv:101203158 | 1632.08 |