Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00370 ATGCCAGCCGGAATGATGATTCCAGCGAGAAACACAGCGTCGTCCATGATCGGAAGAAATGGAAATGTTGGAATTTTTGGGTCCCCAGCCAGCCTTGTTCTTGGTCAGGAGCTGCAGGGAATAGAAATGGGAGAAAATGAATATGGAAGAATGAGAGAAACAGAAGAGTTTGAAAGTGGAACAAAATCAAGTAGTGAGAATCATGAGGTTGGTTCCGGTGATGACCAACTCAATAACCAACGCCCCAACAAGAAAAAGCGTTACCACCGCCACACTCAGCATCAGATCCAACAAATGGAAGCGTTTTTCAAGGAATGCCCTCACCCAGATGACAAGCAAAGGAAGGAGCTAAGTAGGGAGTTGAATTTAGAGCCATTGCAAGTCAAGTTCTGGTTCCAAAACAAGAGAACTCAGATGAAGACACATCATGAGCGACATGAAAACACACAGCTCCGAACAGAAAATGAGAAGCTAAGAGCAGATAATATGAGATATAGAGAAGCTCTAAGCAATGCCACGTGTCCCAATTGTGGAGGTCCTACCGCCATTGGAGAGATGTCCTTTGATGAACATCATCTTAGGCTTGAAAATGCTCGCTTGAGAGAAGAGATCGATCGAATTTCAGCCATAGCAGCAAAATACGTTGGAAAGCCAGTATCAAACTACCCTCTTCTTTCCACACCAATCCCTTCACGTCCTCTAGAACTTGGAATGGGAAGCTATGGAGGCCACGATTTGGGCCTTGGACCGGGAGGCGGGGACATGTTCGGGGCAGCGGACCTTCTAAGGACCATAAGTGCACCATCAGAGGCGGACAAGCCGGTAATCATCGAGCTAGCGGTTGCAGCAATGGAGGAGCTGGTCAGAATGGCTCAGATGGGTGAGCCACTGTGGATGACAGGGGTTGATGGGTCAACGAATGAGCTTAATGAAGAGGAATATGTTAGAAGCTTTCCAAGAGGAATTGGTCCTAAGCCATCTGGGTTTAGCTGTGAAGCTTCTCGTGCTACTGCTGTTGTCATTATGAATCACATTAGCCTCGTTGAGATGCTCATGGATGTGAATCAATGGTCAACAACATTCACAGGGATTGTGTCAAGAGCTATGACATTAGAAGTATTATCAACCGGCGTTGCTGGAAACTACAACGGAGCATTACAAGTGATGACATCCGAATTGCAAGTGCCTTCTCCACTAGTTCCAACTCGGGAGAGCTATTTTGTGAGGTACTGTAAACAACATGGTGAGGGAACATGGGCTGTTGTCGACGTTTCCTTAGACACTTTACGCCCAGCTCCTGCTCTTAGATGTAGAAGAAGGCCATCCGGCTGCTTAATCCAAGAAATGCCCAATGGTTATTCTAAGGTTACATGGGTTGAGCATGTTGAGGTGGATGATCGTGGTGTCCACAGTTTATACAACCAGCTAGTTAGCTCTGGCCACGCGTTCGGCGCAAAGCGTTGGATTGCCACGTTGGATCGTCAGTGTGAACGACTCGCCAGCGCCATGGCCACCAGTATTATTCCTAATGGCGATGCTGGAGTGATAACAAATCAAGAAGGAAGAAAGAGCATGTTGAAGCTGGCAGAGAGAATGGTGATGAGCTTTTGCGGTGGAGTGAGCGCGTCGACAACACACACTTGGACGACTCTGTCGGGAACCGGAGCTGACGACGTTCGAGTTATGACGAGAAAGAGCGTTGACGATCCCGGCAGACCATCCGGCATTGTCCTCAGCGCAGCCACTTCCTTTTGGCTGCCTCTTCCTCCCAACAGAGTCTTCCATTTTCTCAGAGATGAAAATTCTCGTAATGAGTGGGATATTCTTTCAAATGGTGGAGTTGTTCAAGAAATGGCTCACATTGCCAATGGCCGTGACACAGGCAATTGTGTTTCCTTACTACGAGTTAACAGTGCAAATTCAAGCCAAAGTAACATGTTAATATTACAAGAAAGCAGCACAGATCAAACAGCCTCATTCGTGATATACGCACCGGTGGACATTGTGTCAATCAACGTGGTGCTAAACGGGGGAGATCCCGATTATGTGGCTCTTCTGCCATCTGGATTTGCTATTCTTCCCGACGGAAGCACGGCGTCAAGCGGGGGGGCCAATGGCGTGGGGGAACATGGGTCCGGTGGGTCGCTTTTAACGGTGGCGTTTCAGATATTGGTTGACTCGGTTCCCACAGCAAAATTATCTCTTGGGTCAGTTGCGACGGTCAACAATCTCATTGCATGTACGGTTGAGAGAATTAAAGCCTCTTTGTCATGCGACAATCCTTAA 2286 47.73 MPAGMMIPARNTASSMIGRNGNVGIFGSPASLVLGQELQGIEMGENEYGRMRETEEFESGTKSSSENHEVGSGDDQLNNQRPNKKKRYHRHTQHQIQQMEAFFKECPHPDDKQRKELSRELNLEPLQVKFWFQNKRTQMKTHHERHENTQLRTENEKLRADNMRYREALSNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSNYPLLSTPIPSRPLELGMGSYGGHDLGLGPGGGDMFGAADLLRTISAPSEADKPVIIELAVAAMEELVRMAQMGEPLWMTGVDGSTNELNEEEYVRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTTFTGIVSRAMTLEVLSTGVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHGEGTWAVVDVSLDTLRPAPALRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSIIPNGDAGVITNQEGRKSMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPSGIVLSAATSFWLPLPPNRVFHFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESSTDQTASFVIYAPVDIVSINVVLNGGDPDYVALLPSGFAILPDGSTASSGGANGVGEHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNP* 762
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2759169 2766022 + CsaV3_7G003700.1 Csa07g00370 535933

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00370 761 Gene3D - 311 495 IPR023393 -
Csa07g00370 761 ProSitePatterns 'Homeobox' domain signature. 117 140 IPR017970 GO:0000981|GO:0006355
Csa07g00370 761 SUPERFAMILY Homeodomain-like 68 141 IPR009057 -
Csa07g00370 761 Gene3D - 71 159 - -
Csa07g00370 761 SMART HOX_1 83 146 IPR001356 GO:0003677
Csa07g00370 761 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 47 758 IPR042160 -
Csa07g00370 761 ProSiteProfiles START domain profile. 269 501 IPR002913 GO:0008289
Csa07g00370 761 SUPERFAMILY Bet v1-like 518 753 - -
Csa07g00370 761 MobiDBLite consensus disorder prediction 64 78 - -
Csa07g00370 761 CDD homeodomain 85 143 IPR001356 GO:0003677
Csa07g00370 761 CDD START_ArGLABRA2_like 273 497 - -
Csa07g00370 761 Pfam START domain 279 498 IPR002913 GO:0008289
Csa07g00370 761 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 47 758 - -
Csa07g00370 761 MobiDBLite consensus disorder prediction 52 94 - -
Csa07g00370 761 Coils Coil 148 168 - -
Csa07g00370 761 Pfam Homeodomain 85 140 IPR001356 GO:0003677
Csa07g00370 761 ProSiteProfiles 'Homeobox' domain profile. 82 142 IPR001356 GO:0003677
Csa07g00370 761 SUPERFAMILY Bet v1-like 271 500 - -
Csa07g00370 761 SMART START_1 278 498 IPR002913 GO:0008289
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00370 K09338 HD-ZIP; homeobox-leucine zipper protein - csv:101219415 1476.46
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g01692 Csa-Chr3:12676781 Csa07g00370 Csa-Chr7:2759169 0 dispersed
Csa03g01781 Csa-Chr3:13390651 Csa07g00370 Csa-Chr7:2759169 3.14E-150 dispersed
Csa03g04584 Csa-Chr3:39911797 Csa07g00370 Csa-Chr7:2759169 0 dispersed
Csa06g00579 Csa-Chr6:4976972 Csa07g00370 Csa-Chr7:2759169 0 dispersed
Csa01g01099 Csa-Chr1:6814980 Csa07g00370 Csa-Chr7:2759169 0 wgd
Csa02g02688 Csa-Chr2:23428044 Csa07g00370 Csa-Chr7:2759169 0 wgd
Csa06g03532 Csa-Chr6:28760373 Csa07g00370 Csa-Chr7:2759169 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi12g521 Blo02g00112 Blo15g00501 Bda06g00361 Bda13g00620 Bpe12g00225 . . . Cmo11g01907 Cmo19g00954 Cma02g00163 Cma20g00628 Car02g00137 Car20g00526 Sed05g2013 Cpe15g00750 Cpe04g00733 Bhi05g01315 Tan02g0328 Cmetu01g0772 Lac12g0611 Hepe02g0212 . . Cla02g00180 Cam02g0194 Cec02g0192 Cco02g0186 Clacu02g0189 Cmu02g0186 Cre02g0518 Cone3ag1343 Cone10ag1284 Cone8ag1442 Cone12ag1384 . Csa07g00370 . Cme01g00416 . . Bda14g00713 . Bpe14g00705 Bpe07g00606 Bma02g01326 Bma12g00798 Sed01g0475 Cmo02g00167 Cmo20g00616 Cma11g01832 Cma19g00929 Car11g01520 Car19g00719 Cpe16g00448 Cpe05g01445 Bhi10g01447 Tan05g0866 Cmetu11g1134 . Hepe08g0472 . . Cla02g00833 Cam02g0971 Cec02g0890 Cco02g0929 Clacu02g0881 Cmu02g0869 Cre02g1186 Lsi11g01463 . Chy01g00419 Cme11g00781
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Csa06g00579 . 59 584 Homeobox Transcription Factor Family AT4G00730 65.2 1.1e-177 620.2
Csa03g01692 . 11 497 Homeobox Transcription Factor Family AT4G00730 55.9 2.5e-139 492.7
Csa03g03923 CCT 1 286 Homeobox Transcription Factor Family AT3G01470 52.6 4.0e-58 221.9
Csa05g02906 CCT 1 276 Homeobox Transcription Factor Family AT3G01470 51.2 9.9e-49 190.7
Csa03g02389 . 115 759 Homeobox Transcription Factor Family AT1G79840 61.0 2.5e-213 738.8
Csa05g02432 . 4 299 Homeobox Transcription Factor Family AT1G69780 65.6 2.5e-82 302.4
Csa01g02627 . 4 845 Homeobox Transcription Factor Family AT2G34710 79.7 0.0e+00 1332.0
Csa06g03845 . 1 727 Homeobox Transcription Factor Family AT2G34710 75.9 0.0e+00 1145.6
Csa06g01195 CCT,ECH 23 842 Homeobox Transcription Factor Family AT2G34710 69.1 0.0e+00 1133.2
Csa07g02448 . 3 838 Homeobox Transcription Factor Family AT2G34710 66.2 0.0e+00 1099.0
Csa03g04545 . 1 843 Homeobox Transcription Factor Family AT2G34710 64.9 7.6e-314 1073.2
Csa01g01393 CCT,ECH 3 182 Homeobox Transcription Factor Family AT2G34710 62.1 8.4e-54 209.1
Csa07g02448 . 1 789 Homeobox Transcription Factor Family AT1G52150 85.6 0.0e+00 1354.0
Csa03g04545 . 7 794 Homeobox Transcription Factor Family AT1G52150 77.8 0.0e+00 1224.9
Csa01g02627 . 14 796 Homeobox Transcription Factor Family AT1G52150 66.8 2.7e-296 1014.6
Csa06g01195 CCT,ECH 23 792 Homeobox Transcription Factor Family AT1G52150 67.4 2.8e-293 1004.6
Csa06g03845 . 1 683 Homeobox Transcription Factor Family AT1G52150 62.2 6.9e-244 840.5
Csa01g01393 CCT,ECH 3 178 Homeobox Transcription Factor Family AT1G52150 64.8 2.7e-54 210.7
Csa03g00254 . 33 276 Homeobox Transcription Factor Family AT4G16780 68.2 1.8e-77 286.2
Csa03g00756 CCT 6 288 Homeobox Transcription Factor Family AT4G16780 53.4 1.2e-65 246.9
Csa06g03058 . 71 228 Homeobox Transcription Factor Family AT4G16780 66.7 2.1e-49 193.0
Csa07g02054 . 157 280 Homeobox Transcription Factor Family AT4G16780 76.0 9.7e-47 184.1
Csa03g03564 . 235 349 Homeobox Transcription Factor Family AT4G16780 81.9 6.3e-46 181.4
Csa03g02434 . 139 264 Homeobox Transcription Factor Family AT4G16780 70.9 1.1e-42 170.6
Csa01g02201 . 136 255 Homeobox Transcription Factor Family AT4G16780 69.2 1.0e-40 164.1
Csa04g02512 . 99 256 Homeobox Transcription Factor Family AT4G16780 57.6 2.3e-40 162.9
Csa03g00254 . 3 224 Homeobox Transcription Factor Family AT2G44910 62.6 8.0e-66 247.7
Csa03g00756 CCT 32 258 Homeobox Transcription Factor Family AT2G44910 63.8 3.1e-62 235.7
Csa06g03058 . 71 235 Homeobox Transcription Factor Family AT2G44910 62.5 6.8e-49 191.4
Csa07g02054 . 110 289 Homeobox Transcription Factor Family AT2G44910 62.6 2.0e-48 189.9
Csa03g03564 . 235 354 Homeobox Transcription Factor Family AT2G44910 79.3 1.4e-46 183.7
Csa03g02434 . 148 266 Homeobox Transcription Factor Family AT2G44910 70.0 6.8e-41 164.9
Csa01g02201 . 136 256 Homeobox Transcription Factor Family AT2G44910 66.9 5.7e-40 161.8
Csa04g02512 . 93 256 Homeobox Transcription Factor Family AT2G44910 53.9 9.8e-40 161.0
Csa03g02942 . 136 248 Homeobox Transcription Factor Family AT2G44910 67.5 1.2e-37 154.1
Csa03g04545 . 18 843 Homeobox Transcription Factor Family AT4G32880 79.5 0.0e+00 1338.6
Csa07g02448 . 9 838 Homeobox Transcription Factor Family AT4G32880 78.9 0.0e+00 1322.8
Csa01g02627 . 14 845 Homeobox Transcription Factor Family AT4G32880 65.3 7.4e-313 1069.7
Csa06g01195 CCT,ECH 14 842 Homeobox Transcription Factor Family AT4G32880 65.6 2.7e-307 1051.2
Csa06g03845 . 1 727 Homeobox Transcription Factor Family AT4G32880 60.5 3.0e-258 888.3
Csa01g01393 CCT,ECH 3 178 Homeobox Transcription Factor Family AT4G32880 65.4 2.2e-54 211.1
Csa01g02627 . 7 845 Homeobox Transcription Factor Family AT1G30490 77.8 0.0e+00 1278.8
Csa06g03845 . 1 727 Homeobox Transcription Factor Family AT1G30490 75.3 0.0e+00 1122.8
Csa06g01195 CCT,ECH 5 842 Homeobox Transcription Factor Family AT1G30490 65.7 0.0e+00 1085.9
Csa07g02448 . 2 838 Homeobox Transcription Factor Family AT1G30490 63.5 1.1e-305 1045.8
Csa03g04545 . 2 843 Homeobox Transcription Factor Family AT1G30490 62.2 1.8e-295 1011.9
Csa01g01393 CCT,ECH 3 178 Homeobox Transcription Factor Family AT1G30490 61.3 1.6e-52 204.9
Csa02g02688 . 38 758 Homeobox Transcription Factor Family AT4G21750 70.8 1.3e-295 1012.3
Csa07g00370 . 84 760 Homeobox Transcription Factor Family AT4G21750 74.6 2.4e-294 1008.1
Csa06g03532 CCT 1 716 Homeobox Transcription Factor Family AT4G21750 66.5 3.6e-274 941.0
Csa01g01099 CCT 7 737 Homeobox Transcription Factor Family AT4G21750 67.2 5.2e-273 937.2
Csa06g00579 . 93 840 Homeobox Transcription Factor Family AT4G21750 54.6 5.9e-216 747.7
Csa02g01490 . 246 505 Homeobox Transcription Factor Family AT5G41410 57.5 2.1e-67 253.8
Csa06g02874 . 301 553 Homeobox Transcription Factor Family AT5G41410 51.3 2.1e-67 253.8
Csa03g03494 . 256 456 Homeobox Transcription Factor Family AT5G41410 56.0 3.0e-61 233.4
Csa06g02470 . 258 467 Homeobox Transcription Factor Family AT5G41410 53.3 8.1e-59 225.3
Csa02g01292 CCT,ECH 283 482 Homeobox Transcription Factor Family AT5G41410 54.9 1.1e-58 224.9
Csa07g02163 . 228 426 Homeobox Transcription Factor Family AT5G41410 51.2 1.1e-50 198.4
Csa01g01369 . 439 640 Homeobox Transcription Factor Family AT5G41410 52.5 9.0e-50 195.3
Csa04g01545 CCT,ECH 170 339 Homeobox Transcription Factor Family AT5G41410 50.3 3.7e-43 173.3
Csa02g01490 . 89 483 Homeobox Transcription Factor Family AT4G36870 54.6 7.5e-104 374.8
Csa05g00256 . 149 363 Homeobox Transcription Factor Family AT4G36870 56.8 8.9e-65 245.0
Csa01g01369 . 433 610 Homeobox Transcription Factor Family AT4G36870 56.7 4.9e-47 186.0
Csa01g01369 . 433 609 Homeobox Transcription Factor Family AT1G75410 50.8 2.3e-41 166.8
Csa06g02874 . 292 696 Homeobox Transcription Factor Family AT2G23760 52.9 4.4e-106 382.5
Csa02g01490 . 238 653 Homeobox Transcription Factor Family AT2G23760 59.1 1.7e-105 380.6
Csa03g03494 . 189 457 Homeobox Transcription Factor Family AT1G19700 52.5 1.3e-65 247.7
Csa06g02470 . 190 468 Homeobox Transcription Factor Family AT1G19700 52.5 2.5e-64 243.4
Csa05g00256 . 192 391 Homeobox Transcription Factor Family AT1G19700 57.7 4.6e-58 222.6
Csa01g01369 . 439 632 Homeobox Transcription Factor Family AT1G19700 53.6 3.2e-51 199.9
Csa04g01545 CCT,ECH 112 341 Homeobox Transcription Factor Family AT5G02030 57.8 7.4e-70 261.9
Csa03g00254 . 7 276 Homeobox Transcription Factor Family AT4G17460 54.0 2.4e-66 249.2
Csa03g00756 CCT 6 256 Homeobox Transcription Factor Family AT4G17460 57.5 1.1e-61 233.8
Csa07g02054 . 150 286 Homeobox Transcription Factor Family AT4G17460 71.1 3.4e-44 175.6
Csa06g03058 . 1 230 Homeobox Transcription Factor Family AT4G17460 50.8 9.9e-44 174.1
Csa03g03564 . 235 349 Homeobox Transcription Factor Family AT4G17460 79.3 4.2e-42 168.7
Csa03g02434 . 129 264 Homeobox Transcription Factor Family AT4G17460 63.3 1.3e-38 157.1
Csa03g00254 . 1 276 Homeobox Transcription Factor Family AT5G47370 56.3 1.2e-68 256.9
Csa03g00756 CCT 6 255 Homeobox Transcription Factor Family AT5G47370 57.1 4.5e-60 228.4
Csa07g02054 . 72 286 Homeobox Transcription Factor Family AT5G47370 51.8 7.4e-47 184.5
Csa06g03058 . 71 230 Homeobox Transcription Factor Family AT5G47370 63.6 6.9e-45 177.9
Csa03g03564 . 235 348 Homeobox Transcription Factor Family AT5G47370 82.6 5.8e-44 174.9
Csa03g02434 . 140 265 Homeobox Transcription Factor Family AT5G47370 67.7 2.5e-39 159.5
Csa01g02201 . 136 251 Homeobox Transcription Factor Family AT5G47370 69.0 9.0e-37 151.0
Csa06g03058 . 1 265 Homeobox Transcription Factor Family AT4G37790 64.4 1.5e-84 309.7
Csa03g02434 . 39 303 Homeobox Transcription Factor Family AT4G37790 56.7 3.9e-69 258.5
Csa04g02512 . 36 295 Homeobox Transcription Factor Family AT4G37790 52.2 8.2e-59 224.2
Csa03g00254 . 8 223 Homeobox Transcription Factor Family AT4G37790 53.4 2.8e-51 199.1
Csa07g02054 . 152 302 Homeobox Transcription Factor Family AT4G37790 66.2 7.0e-50 194.5
Csa03g03564 . 235 348 Homeobox Transcription Factor Family AT4G37790 82.5 3.5e-49 192.2
Csa03g00756 CCT 141 255 Homeobox Transcription Factor Family AT4G37790 77.4 6.8e-45 177.9
Csa01g02201 . 136 251 Homeobox Transcription Factor Family AT4G37790 73.3 9.2e-42 167.5
Csa03g02942 . 134 248 Homeobox Transcription Factor Family AT4G37790 70.4 2.9e-40 162.5
Csa03g00756 CCT 1 259 Homeobox Transcription Factor Family AT3G60390 59.1 1.4e-70 263.5
Csa03g00254 . 25 272 Homeobox Transcription Factor Family AT3G60390 60.6 1.8e-70 263.1
Csa07g02054 . 102 289 Homeobox Transcription Factor Family AT3G60390 61.2 3.0e-49 192.6
Csa06g03058 . 71 228 Homeobox Transcription Factor Family AT3G60390 62.9 7.4e-48 188.0
Csa03g03564 . 235 351 Homeobox Transcription Factor Family AT3G60390 81.4 4.8e-47 185.3
Csa03g02434 . 108 264 Homeobox Transcription Factor Family AT3G60390 60.3 1.9e-43 173.3
Csa01g02201 . 136 263 Homeobox Transcription Factor Family AT3G60390 66.4 1.0e-41 167.5
Csa03g02942 . 134 252 Homeobox Transcription Factor Family AT3G60390 65.0 1.8e-38 156.8
Csa04g02512 . 142 256 Homeobox Transcription Factor Family AT3G60390 67.8 2.4e-38 156.4
Csa06g03058 . 1 265 Homeobox Transcription Factor Family AT2G22800 61.4 2.5e-76 282.3
Csa03g02434 . 39 303 Homeobox Transcription Factor Family AT2G22800 54.5 3.5e-62 235.3
Csa04g02512 . 36 295 Homeobox Transcription Factor Family AT2G22800 52.4 9.0e-58 220.7
Csa03g00254 . 8 223 Homeobox Transcription Factor Family AT2G22800 56.3 6.9e-50 194.5
Csa07g02054 . 149 279 Homeobox Transcription Factor Family AT2G22800 71.8 1.7e-48 189.9
Csa03g03564 . 235 348 Homeobox Transcription Factor Family AT2G22800 78.9 3.2e-47 185.7
Csa03g00756 CCT 141 255 Homeobox Transcription Factor Family AT2G22800 73.9 3.7e-43 172.2
Csa03g02942 . 134 248 Homeobox Transcription Factor Family AT2G22800 69.6 1.1e-39 160.6
Csa01g02201 . 115 251 Homeobox Transcription Factor Family AT2G22800 63.5 2.5e-39 159.5
Csa06g00579 . 53 841 Homeobox Transcription Factor Family AT3G61150 66.0 7.0e-276 946.8
Csa03g01692 . 23 749 Homeobox Transcription Factor Family AT3G61150 58.2 6.8e-231 797.3
Csa07g00370 . 62 760 Homeobox Transcription Factor Family AT3G61150 52.1 4.2e-204 708.4
Csa04g02513 CCT 101 370 Homeobox Transcription Factor Family AT4G08150 80.3 1.3e-121 433.3
Csa02g01861 CCT 113 392 Homeobox Transcription Factor Family AT4G08150 62.8 6.6e-94 341.3
Csa06g03487 . 95 348 Homeobox Transcription Factor Family AT4G08150 56.6 4.8e-76 282.0
Csa05g02319 . 79 315 Homeobox Transcription Factor Family AT4G08150 55.7 5.1e-70 261.9
Csa07g00330 . 85 330 Homeobox Transcription Factor Family AT4G08150 56.2 1.1e-69 260.8
Csa02g01760 . 79 317 Homeobox Transcription Factor Family AT4G08150 52.4 2.0e-66 250.0
Csa05g02319 . 1 323 Homeobox Transcription Factor Family AT1G70510 60.4 1.6e-103 372.9
Csa02g01760 . 18 314 Homeobox Transcription Factor Family AT1G70510 56.6 8.6e-89 323.9
Csa04g02513 CCT 109 344 Homeobox Transcription Factor Family AT1G70510 52.5 3.9e-65 245.4
Csa04g02662 . 130 454 Homeobox Transcription Factor Family AT5G25220 80.1 7.1e-139 490.7
Csa02g02412 . 173 451 Homeobox Transcription Factor Family AT5G25220 82.9 7.1e-131 464.2
Csa05g00334 . 17 302 Homeobox Transcription Factor Family AT5G25220 67.9 1.3e-103 373.6
Csa04g02662 . 168 461 Homeobox Transcription Factor Family AT5G11060 82.8 1.1e-136 483.4
Csa02g02412 . 169 449 Homeobox Transcription Factor Family AT5G11060 77.9 9.4e-125 443.7
Csa05g00334 . 32 300 Homeobox Transcription Factor Family AT5G11060 68.4 2.5e-101 365.9
Csa04g02662 . 80 440 Homeobox Transcription Factor Family AT4G32040 60.1 3.2e-114 408.7
Csa02g02412 . 90 435 Homeobox Transcription Factor Family AT4G32040 62.8 8.2e-110 394.0
Csa05g00334 . 25 286 Homeobox Transcription Factor Family AT4G32040 63.8 1.5e-90 330.1
Csa05g02319 . 1 325 Homeobox Transcription Factor Family AT1G23380 67.9 7.6e-120 427.2
Csa02g01760 . 13 314 Homeobox Transcription Factor Family AT1G23380 59.4 5.3e-97 351.3
Csa04g02513 CCT 104 344 Homeobox Transcription Factor Family AT1G23380 55.3 2.7e-69 259.2
Csa02g00505 . 59 297 Homeobox Transcription Factor Family AT1G23380 53.5 2.3e-68 256.1
Csa06g03487 . 95 335 Homeobox Transcription Factor Family AT1G23380 50.2 3.7e-66 248.8
Csa05g00334 . 1 300 Homeobox Transcription Factor Family AT1G62990 78.9 1.2e-129 459.5
Csa04g02662 . 177 454 Homeobox Transcription Factor Family AT1G62990 65.5 1.5e-98 356.3
Csa02g02412 . 173 449 Homeobox Transcription Factor Family AT1G62990 65.1 3.6e-97 351.7
Csa03g04584 . 3 781 Homeobox Transcription Factor Family AT4G17710 50.6 3.7e-188 655.2
Csa05g02432 . 4 299 Homeobox Transcription Factor Family AT1G26960 58.6 4.6e-64 241.5
Csa05g02973 . 1 296 Homeobox Transcription Factor Family AT3G01220 53.0 5.5e-50 194.9
Csa01g00502 . 1 501 Homeobox Transcription Factor Family AT1G17920 59.6 8.0e-156 547.7
Csa01g00502 . 19 502 Homeobox Transcription Factor Family AT1G73360 62.8 5.8e-173 604.7
Csa03g01781 . 28 553 Homeobox Transcription Factor Family AT1G73360 50.6 3.4e-149 525.8
Csa05g02409 . 1 191 Homeobox Transcription Factor Family AT1G27050 51.9 1.0e-50 196.8
Csa05g01220 . 33 192 Homeobox Transcription Factor Family AT1G70920 59.5 9.0e-43 170.2
Csa05g02044 . 33 196 Homeobox Transcription Factor Family AT1G70920 54.9 6.0e-39 157.5
Csa02g02688 . 62 758 Homeobox Transcription Factor Family AT1G05230 82.4 0.0e+00 1098.2
Csa07g00370 . 49 759 Homeobox Transcription Factor Family AT1G05230 77.4 1.1e-312 1068.9
Csa06g03532 CCT 21 719 Homeobox Transcription Factor Family AT1G05230 63.9 3.2e-248 854.7
Csa01g01099 CCT 62 737 Homeobox Transcription Factor Family AT1G05230 65.2 8.8e-246 846.7
Csa06g00579 . 111 841 Homeobox Transcription Factor Family AT1G05230 55.7 1.2e-213 740.0
Csa06g03219 . 9 217 Homeobox Transcription Factor Family AT2G18550 51.4 8.0e-41 164.1
Csa04g00524 . 1 150 Homeobox Transcription Factor Family AT2G18550 58.6 1.8e-37 152.9
Csa02g02688 . 78 758 Homeobox Transcription Factor Family AT2G32370 55.6 8.4e-204 707.2
Csa07g00370 . 67 758 Homeobox Transcription Factor Family AT2G32370 53.4 1.5e-200 696.4
Csa06g00579 . 105 838 Homeobox Transcription Factor Family AT5G52170 51.2 4.2e-197 684.9
Csa03g01692 . 1 750 Homeobox Transcription Factor Family AT5G52170 50.6 4.3e-194 674.9
Csa03g04584 . 14 781 Homeobox Transcription Factor Family AT5G46880 58.2 2.3e-250 862.1
Csa06g03655 . 12 1476 Homeobox Transcription Factor Family AT1G28420 52.1 0.0e+00 1130.2
Csa03g03494 . 184 466 Homeobox Transcription Factor Family AT2G16400 56.4 6.8e-77 285.0
Csa06g02470 . 188 471 Homeobox Transcription Factor Family AT2G16400 54.6 1.0e-72 271.2
Csa02g01490 . 239 505 Homeobox Transcription Factor Family AT2G16400 51.6 1.2e-65 247.7
Csa05g00256 . 149 394 Homeobox Transcription Factor Family AT2G16400 51.0 1.8e-61 233.8
Csa01g01369 . 439 629 Homeobox Transcription Factor Family AT2G16400 55.2 1.5e-52 204.1
Csa04g01545 CCT,ECH 171 331 Homeobox Transcription Factor Family AT2G16400 52.0 3.4e-44 176.4
Csa03g03143 CCT,ECH 168 335 Homeobox Transcription Factor Family AT2G27220 51.5 5.2e-44 175.6
Csa03g03494 . 1 717 Homeobox Transcription Factor Family AT2G35940 50.7 3.1e-152 535.8
Csa07g02163 . 155 418 Homeobox Transcription Factor Family AT2G35940 52.0 4.9e-65 246.1
Csa06g02874 . 285 558 Homeobox Transcription Factor Family AT2G35940 50.7 1.1e-64 245.0
Csa01g01369 . 439 634 Homeobox Transcription Factor Family AT2G35940 60.6 1.4e-59 228.0
Csa03g03143 CCT,ECH 168 331 Homeobox Transcription Factor Family AT2G35940 53.7 1.4e-48 191.4
Csa05g00256 . 223 390 Homeobox Transcription Factor Family AT4G34610 62.5 4.0e-54 209.5
Csa04g01545 CCT,ECH 188 331 Homeobox Transcription Factor Family AT4G34610 55.4 1.3e-41 167.9
Csa02g02688 . 38 755 Homeobox Transcription Factor Family AT4G04890 73.4 3.4e-301 1030.8
Csa07g00370 . 56 759 Homeobox Transcription Factor Family AT4G04890 74.5 6.4e-300 1026.5
Csa06g03532 CCT 1 716 Homeobox Transcription Factor Family AT4G04890 68.6 1.8e-278 955.3
Csa01g01099 CCT 1 737 Homeobox Transcription Factor Family AT4G04890 66.8 2.7e-274 941.4
Csa06g00579 . 105 840 Homeobox Transcription Factor Family AT4G04890 55.0 4.7e-218 754.6
Csa03g01692 . 18 748 Homeobox Transcription Factor Family AT4G04890 51.0 1.9e-195 679.5
Csa01g00502 . 12 497 Homeobox Transcription Factor Family AT4G04890 50.5 1.7e-119 427.2
Csa01g02179 . 142 570 Homeobox Transcription Factor Family AT4G29940 59.0 1.8e-132 470.3
Csa06g01195 CCT,ECH 1 842 Homeobox Transcription Factor Family AT5G60690 80.9 0.0e+00 1369.0
Csa01g02627 . 1 845 Homeobox Transcription Factor Family AT5G60690 67.0 0.0e+00 1108.6
Csa07g02448 . 9 838 Homeobox Transcription Factor Family AT5G60690 65.6 3.7e-312 1067.4
Csa03g04545 . 20 843 Homeobox Transcription Factor Family AT5G60690 63.0 1.6e-299 1025.4
Csa06g03845 . 1 727 Homeobox Transcription Factor Family AT5G60690 64.3 1.9e-271 932.2
Csa01g01393 CCT,ECH 3 177 Homeobox Transcription Factor Family AT5G60690 73.1 1.4e-61 235.0
Csa06g03487 . 89 352 Homeobox Transcription Factor Family AT1G62360 79.2 3.5e-116 415.2
Csa07g00330 . 95 344 Homeobox Transcription Factor Family AT1G62360 71.0 1.9e-98 356.3
Csa04g02513 CCT 108 348 Homeobox Transcription Factor Family AT1G62360 61.0 4.6e-76 282.0
Csa05g02319 . 82 324 Homeobox Transcription Factor Family AT1G62360 52.6 2.4e-64 243.0
Csa02g00505 . 57 299 Homeobox Transcription Factor Family AT1G62360 52.2 3.8e-62 235.7
Csa02g01760 . 79 307 Homeobox Transcription Factor Family AT1G62360 55.2 6.4e-62 235.0
Csa02g01861 CCT 120 369 Homeobox Transcription Factor Family AT1G62360 51.4 1.4e-61 233.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000325 5 8 4 2 5 4 7 4 4 4 4 4 7 4 4 6 4 4 6 4 4 4 4 4 4 5 4 9 4 2 138
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
32259 PF01852 START 1.90E-59 CL0209 Csa TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Csa07g00370 Csa_Chr07 FPKM 15.123263 17.419325 7.307798 6.358148 12.855145 11.717199 12.069522 5.809881 5.841433 4.669527