Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00372 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTTCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTTCAAGACCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACATTCCTTGTGCAGGCTGGTATTGTGAAGAAGGAAAACATCAAGATTCACGGTTTCTAA 342 42.4 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHGF* 114
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2775026 2778367 - CsaV3_7G003720.1 Csa07g00372 535935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00372 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Csa07g00372 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Csa07g00372 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Csa07g00372 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Csa07g00372 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Csa07g00372 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Csa07g00372 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Csa07g00372 113 Gene3D - 1 113 - -
Csa07g00372 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g00372 Csa-Chr7:2775026 Csa07g01094 Csa-Chr7:10538881 9.62E-62 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00372 K03113 - csv:101219651 228.409