Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00375 | ATGGCCATTACTCCAAAGCTTTTCTTCCTTCTCCTTTTGCAGCTAATATTTGTATCAACATCTCTCTCAAACATCGCCAGAGCAAATGAGTTGGCGGTTGGGTTTTACAAGAATTGCTGCCCTGGGGTGGAGTATATCGTCGCCAAGACGGTGGCTCAATATGTTAAGAAACAACCAGCAATAGCTGCTTCTTTGTTGAGGATACACTTCCATGACTGCTTTGTTAGGGGATGTGATGGTTCAGTGCTGCTAAATTCCGGACCAAATAACCAAGCTGAGAAAGATGCCATTCCCAACCTTAGTTTAAGAGGTTATAATGTTGTTGATGCCGTTAAAGCTGCCGTTGAAAAGCAATGTCCTGGTGTTGTTTCTTGTGCTGACATCCTTGCTTTGATAGCTCGTGATGCTGTTAGAATGAGTGGAGGCCCAGCTTGGGAAGTTCCAACGGGAAGAAGAGACGGAACTGTATCAATCTCACGAGAAGCATTGATTAATCTGCCTCCTCCTTTCGCTAATATCTCTTCTCTCAAATCAAGTTTCCAATCCAAAGGTCTCTCCCTCAAAGATCTTGTCGTTCTATCCGGAGCACATACAATCGGAGTCTCTCACTGTACCTCTTTCTCCAATCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCCAAACTAGACAAATACTACGCGGCCGCACTCAAGATCAAATGCAAACCAAATGACCAAAAAAAAATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAAGTTATTACACACTCGTTTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACTAAAGCCTACGTTCAGTTTCAGTCTAGTACACGTGGCTCTACTTTCGCCGCCGATTTCGCTAAATCCATGATTAATATGGGGAATATCGGCGTTCTCACCGGTACCGACGGTGAAATTAGGCGCCGGTGTGGTTTTGTTAACTGA | 990 | 45.15 | MAITPKLFFLLLLQLIFVSTSLSNIARANELAVGFYKNCCPGVEYIVAKTVAQYVKKQPAIAASLLRIHFHDCFVRGCDGSVLLNSGPNNQAEKDAIPNLSLRGYNVVDAVKAAVEKQCPGVVSCADILALIARDAVRMSGGPAWEVPTGRRDGTVSISREALINLPPPFANISSLKSSFQSKGLSLKDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAAALKIKCKPNDQKKIVEMDPGSFKTFDQSYYTLVSKRRGLFQSDSALLDDPDTKAYVQFQSSTRGSTFAADFAKSMINMGNIGVLTGTDGEIRRRCGFVN* | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2787973 | 2790084 | + | CsaV3_7G003750.1 | Csa07g00375 | 535938 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00375 | 329 | ProSitePatterns | Peroxidases active site signature. | 62 | 73 | IPR019794 | GO:0004601 | |
Csa07g00375 | 329 | CDD | secretory_peroxidase | 30 | 328 | IPR033905 | GO:0004601|GO:0042744 | |
Csa07g00375 | 329 | Gene3D | Peroxidase, domain 2 | 167 | 308 | - | - | |
Csa07g00375 | 329 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 189 | 199 | IPR019793 | - | |
Csa07g00375 | 329 | Gene3D | - | 34 | 329 | - | - | |
Csa07g00375 | 329 | PANTHER | PEROXIDASE | 11 | 328 | - | - | |
Csa07g00375 | 329 | PANTHER | PEROXIDASE 25-RELATED | 11 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | ProSiteProfiles | Plant heme peroxidase family profile. | 30 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Haem peroxidase superfamily signature | 62 | 76 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Haem peroxidase superfamily signature | 123 | 140 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Haem peroxidase superfamily signature | 141 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Haem peroxidase superfamily signature | 189 | 204 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Haem peroxidase superfamily signature | 248 | 263 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 40 | 59 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 64 | 84 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 103 | 116 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 122 | 132 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 141 | 156 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 188 | 200 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 246 | 261 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 262 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | PRINTS | Plant peroxidase signature | 303 | 316 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | SUPERFAMILY | Heme-dependent peroxidases | 31 | 329 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00375 | 329 | Pfam | Peroxidase | 47 | 288 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g01138 | Csa-Chr6:9459660 | Csa07g00375 | Csa-Chr7:2787973 | 1.44E-84 | dispersed | |
Csa07g00375 | Csa-Chr7:2787973 | Csa07g01949 | Csa-Chr7:19226799 | 1.16E-97 | dispersed | |
Csa07g01952 | Csa-Chr7:19242695 | Csa07g00375 | Csa-Chr7:2787973 | 6.20E-87 | dispersed | |
Csa02g01714 | Csa-Chr2:16871896 | Csa07g00375 | Csa-Chr7:2787973 | 1.60E-93 | transposed | |
Csa04g01970 | Csa-Chr4:19698399 | Csa07g00375 | Csa-Chr7:2787973 | 3.62E-82 | transposed | |
Csa06g00563 | Csa-Chr6:4818821 | Csa07g00375 | Csa-Chr7:2787973 | 4.89E-107 | transposed | |
Csa06g03357 | Csa-Chr6:27981854 | Csa07g00375 | Csa-Chr7:2787973 | 8.07E-95 | transposed | |
Csa02g02696 | Csa-Chr2:23513034 | Csa07g00375 | Csa-Chr7:2787973 | 6.34E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00375 | K00430 | - | csv:101219177 | 644.81 |