Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00375 ATGGCCATTACTCCAAAGCTTTTCTTCCTTCTCCTTTTGCAGCTAATATTTGTATCAACATCTCTCTCAAACATCGCCAGAGCAAATGAGTTGGCGGTTGGGTTTTACAAGAATTGCTGCCCTGGGGTGGAGTATATCGTCGCCAAGACGGTGGCTCAATATGTTAAGAAACAACCAGCAATAGCTGCTTCTTTGTTGAGGATACACTTCCATGACTGCTTTGTTAGGGGATGTGATGGTTCAGTGCTGCTAAATTCCGGACCAAATAACCAAGCTGAGAAAGATGCCATTCCCAACCTTAGTTTAAGAGGTTATAATGTTGTTGATGCCGTTAAAGCTGCCGTTGAAAAGCAATGTCCTGGTGTTGTTTCTTGTGCTGACATCCTTGCTTTGATAGCTCGTGATGCTGTTAGAATGAGTGGAGGCCCAGCTTGGGAAGTTCCAACGGGAAGAAGAGACGGAACTGTATCAATCTCACGAGAAGCATTGATTAATCTGCCTCCTCCTTTCGCTAATATCTCTTCTCTCAAATCAAGTTTCCAATCCAAAGGTCTCTCCCTCAAAGATCTTGTCGTTCTATCCGGAGCACATACAATCGGAGTCTCTCACTGTACCTCTTTCTCCAATCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCCAAACTAGACAAATACTACGCGGCCGCACTCAAGATCAAATGCAAACCAAATGACCAAAAAAAAATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTCGATCAAAGTTATTACACACTCGTTTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCTCTTCTCGACGATCCTGATACTAAAGCCTACGTTCAGTTTCAGTCTAGTACACGTGGCTCTACTTTCGCCGCCGATTTCGCTAAATCCATGATTAATATGGGGAATATCGGCGTTCTCACCGGTACCGACGGTGAAATTAGGCGCCGGTGTGGTTTTGTTAACTGA 990 45.15 MAITPKLFFLLLLQLIFVSTSLSNIARANELAVGFYKNCCPGVEYIVAKTVAQYVKKQPAIAASLLRIHFHDCFVRGCDGSVLLNSGPNNQAEKDAIPNLSLRGYNVVDAVKAAVEKQCPGVVSCADILALIARDAVRMSGGPAWEVPTGRRDGTVSISREALINLPPPFANISSLKSSFQSKGLSLKDLVVLSGAHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAAALKIKCKPNDQKKIVEMDPGSFKTFDQSYYTLVSKRRGLFQSDSALLDDPDTKAYVQFQSSTRGSTFAADFAKSMINMGNIGVLTGTDGEIRRRCGFVN* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2787973 2790084 + CsaV3_7G003750.1 Csa07g00375 535938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00375 329 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Csa07g00375 329 CDD secretory_peroxidase 30 328 IPR033905 GO:0004601|GO:0042744
Csa07g00375 329 Gene3D Peroxidase, domain 2 167 308 - -
Csa07g00375 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Csa07g00375 329 Gene3D - 34 329 - -
Csa07g00375 329 PANTHER PEROXIDASE 11 328 - -
Csa07g00375 329 PANTHER PEROXIDASE 25-RELATED 11 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 ProSiteProfiles Plant heme peroxidase family profile. 30 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa07g00375 329 Pfam Peroxidase 47 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01138 Csa-Chr6:9459660 Csa07g00375 Csa-Chr7:2787973 1.44E-84 dispersed
Csa07g00375 Csa-Chr7:2787973 Csa07g01949 Csa-Chr7:19226799 1.16E-97 dispersed
Csa07g01952 Csa-Chr7:19242695 Csa07g00375 Csa-Chr7:2787973 6.20E-87 dispersed
Csa02g01714 Csa-Chr2:16871896 Csa07g00375 Csa-Chr7:2787973 1.60E-93 transposed
Csa04g01970 Csa-Chr4:19698399 Csa07g00375 Csa-Chr7:2787973 3.62E-82 transposed
Csa06g00563 Csa-Chr6:4818821 Csa07g00375 Csa-Chr7:2787973 4.89E-107 transposed
Csa06g03357 Csa-Chr6:27981854 Csa07g00375 Csa-Chr7:2787973 8.07E-95 transposed
Csa02g02696 Csa-Chr2:23513034 Csa07g00375 Csa-Chr7:2787973 6.34E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00375 K00430 - csv:101219177 644.81