Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00401 ATGCAAAGTAACACCGCCCTAACCTCCTCCGCCTCACTTTTCCCTTTTGCGCGAAAAACAGGAAAGATGTTTGCGGAGACCACGACGCCGACGCCCACGGCGGCAGGAGCCTCCTTACGGTACAGTGGTGTGTTTTTGAAAAGATGTTTCAAGCCTAGCCTAGTGGTTACGCCCCAATGTCGTCGATTGGGTTCTGCTAACTTAGACACGAAGCTTGCTTTATCTATTGCCAAAACTAAACAGAAACCTTGTAAGGAATTGAAGTTTTCTTCTTCTAGAGGAATGTCGATATCACATATTTCTGCAGCAGCATCCCCATATCTATCTGGGGAACAAGGCAGTCTATTCCATAAACTTCCACTTTTGCCTCCACGAAAATATGCTAAAAAGGGTCCTCGGGCATTCAGAGACGACTCTTACAGTGTAAAACGCCAATCTGGGGTTACCCAAAAACCAAAATGGTGGTTGAGGACTTTGGCCTGTGTTCCATATTTGATGGCTTTGCAGATGTCAAGTACAGCATATTACCTCATGCCCTTGTTGGAACACTTGGATGTTGATAATTTGATATTTTATGTCCCCGGATCCGTTCAGAGGTTACCGTGGTGGTTCCCCATGTTGTACTTCAACCTTGCATACTTTGGTGTCGTGAGGAATAAAGAATTGCCTCATTTCGTTCGGTTCCATGTTATGATGGGGATGTTATTAGAAACCTCACTTGACATCATATGGTATGCTAGCAATTTCATGCCACTCATACATTACAATGGCACATACGCAATGCAATATTGGGCTGCAGTGGCGTTCATCTACATTTCCAGCTTGTTAGTGTGTATTAGGAGTTCTCTCTTAGGGACTTATGCCAAAATACCATTCATTTTCGAAAATGCACTTATTCATACATTCTTTAATATAGGACGATATTATCGACCGTTCTAG 939 43.34 MQSNTALTSSASLFPFARKTGKMFAETTTPTPTAAGASLRYSGVFLKRCFKPSLVVTPQCRRLGSANLDTKLALSIAKTKQKPCKELKFSSSRGMSISHISAAASPYLSGEQGSLFHKLPLLPPRKYAKKGPRAFRDDSYSVKRQSGVTQKPKWWLRTLACVPYLMALQMSSTAYYLMPLLEHLDVDNLIFYVPGSVQRLPWWFPMLYFNLAYFGVVRNKELPHFVRFHVMMGMLLETSLDIIWYASNFMPLIHYNGTYAMQYWAAVAFIYISSLLVCIRSSLLGTYAKIPFIFENALIHTFFNIGRYYRPF* 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2930618 2932907 - CsaV3_7G004010.1 Csa07g00401 535964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00401 312 PANTHER PROTEIN TIC 20-IV, CHLOROPLASTIC 61 312 - -
Csa07g00401 312 Pfam Chloroplast import apparatus Tic20-like 128 297 IPR005691 -
Csa07g00401 312 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 61 312 IPR005691 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00901 Csa-Chr6:7260952 Csa07g00401 Csa-Chr7:2930618 2.24E-52 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00401 - - csv:101219652 630.943