Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00420 | ATGGGTTGGAAGAGATCTTCGAGGAATGGCAATTTGAGGATTTGGGTGCAGGTTTTAGTTGGATTCGTGGTCTGTGCAGCCCAAGTTCTTTTGGGAATTACGAATCCAGGGGATTTTTCTGCTATTAGTAGCTTACATACTGCACTTGGACTCCCCAGTCTTCCTGGATGGGGCATCGGGCAAGACCCATGTGGAGACGCATGGCAGGGTGTTGTTTGTAATGATTCAAGTATCATTAGAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTGTTTTCTTCAATCCAAACGATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAATTTACCCGTTACCCTGCAGAATTTTTTTCTTTCAGCTAATCAGTTCACAGGAAGCATTCCGAGTTCATTATCATCCTTGACTCAACTGACAGCAATGTCGTTGAATGATAACAAATTAAGCGGAGAAATACCTGATTCCTTTCAAGTCATTTCTCAATTGGTCAATTTTGACTTATCCAACAACAACTTGAGTGGGCCACTGCCTCCATCTGTCAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTGTCAGGAACCCTTGATGTTCTACAAGATCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTCAGAAAGGATGGAAACCCATTTAATTCTTCTGTCTCTCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCAAAGCCAGCACCAGCCCCGCCCGTTTCTGGAGGACCACCAGTTTCTGGAGCACCTCCATCTTCTCAACAAAGACCTAAGAAACAGGCTGATGGACCATCGGCTTCTGAGGAATCCAGTTCTGGAAAAAATAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCTTTCATAATTTTGGTCTTGGCATGCGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAAGAAGTGATAGTGTTTCAAAGCGACATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAACGTTGGAAATCAGGGAGCCATGCCCCAAACAAATGATCAGATACCTAAAGTAGTTCCAAAAGAGCCAGTTGTAAGGATGAAGCAGGAGACTCAAACAGAGGTTCAGAAGGTTCCAAAAGATAATGTAGAGAGAGAGAAAAACATGCCAAGAATGAGCGCCATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCACACTCGATGTCTATCTAATGCCTCCTCCTCCCCCTCCCCCTCCCCCACCACCTCCTCCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCACTGTTCCAGCCGAAGTTCCTCCCTTGAAGCCTCTCACTAAAAATAAAATTACCTTACCTTTTGCGAGACCTTATACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGAAATGTTTATAGGGCACACCTCCCCAGTGGGAAAGTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCTGCAAAAGGATGATGAGTTTCTCGAGCTGGTCAATAATATTGATAGAATCCGACATGCTAATGTGGTTGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTTTGAGTATTGCAGTGGTGGAACATTGCAGGATGCACTGCACTCAGACGAAGAGTTCAGAAAGAAGCTTTCATGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATTTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAACTTCAAATCTGCGAATATTCTACTGGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCACTAATATCAAAAGGAGCTGTTAGTCAGCTCTCTGGTCAGCTTCTAACTGCATATGGTTATGGAGCGCCAGAATTTGAATCAGGTGTTTATACACTTGAGAGTGATGTTTACAGCTTTGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTACGACAGAACAAGGATCAGAGGTGAGCAGTTTCTAGTTAGATGGGCAATTCCGCAGCTTCACGACATAGAGGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCGATACCCTGCCAAGTCCTTATCATACTTTGCCGATATCATATCTAAATGTGTTCAGTCCGAGCCTGAATTCCGGCCACCAATGTCATCAGTTGTTCAAGACTTGCTCAACATGATTAGGAGAGAACCACAAGGCAGTGGTTCAAGTGAGGGTTGA | 2379 | 44.56 | MGWKRSSRNGNLRIWVQVLVGFVVCAAQVLLGITNPGDFSAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIRIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSNLPVTLQNFFLSANQFTGSIPSSLSSLTQLTAMSLNDNKLSGEIPDSFQVISQLVNFDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSKPAPAPPVSGGPPVSGAPPSSQQRPKKQADGPSASEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRRSDSVSKRHQIGAYRGERENVGNQGAMPQTNDQIPKVVPKEPVVRMKQETQTEVQKVPKDNVEREKNMPRMSAIPKKDHHEVDMSTLDVYLMPPPPPPPPPPPPPPPPPPPPVEEVTAVPTVPAEVPPLKPLTKNKITLPFARPYTIASLQQYTNSFSQENLLGEGMLGNVYRAHLPSGKVLAVKKLDKRAFSLQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIFEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANILLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRIRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPQGSGSSEG* | 793 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3062611 | 3071172 | - | CsaV3_7G004200.1 | Csa07g00420 | 535983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00420 | 792 | Pfam | Protein tyrosine and serine/threonine kinase | 505 | 776 | IPR001245 | GO:0004672|GO:0006468 | |
Csa07g00420 | 792 | Gene3D | Transferase(Phosphotransferase) domain 1 | 581 | 785 | - | - | |
Csa07g00420 | 792 | MobiDBLite | consensus disorder prediction | 281 | 306 | - | - | |
Csa07g00420 | 792 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 447 | 457 | - | - | |
Csa07g00420 | 792 | Gene3D | Phosphorylase Kinase; domain 1 | 475 | 579 | - | - | |
Csa07g00420 | 792 | ProSiteProfiles | Protein kinase domain profile. | 502 | 780 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Csa07g00420 | 792 | MobiDBLite | consensus disorder prediction | 247 | 312 | - | - | |
Csa07g00420 | 792 | MobiDBLite | consensus disorder prediction | 255 | 280 | - | - | |
Csa07g00420 | 792 | PANTHER | PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED | 23 | 790 | - | - | |
Csa07g00420 | 792 | Gene3D | Ribonuclease Inhibitor | 143 | 254 | IPR032675 | - | |
Csa07g00420 | 792 | PANTHER | OS01G0253100 PROTEIN | 23 | 790 | IPR045271 | GO:0004714|GO:0006468 | |
Csa07g00420 | 792 | SUPERFAMILY | Protein kinase-like (PK-like) | 479 | 776 | IPR011009 | - | |
Csa07g00420 | 792 | Gene3D | Ribonuclease Inhibitor | 43 | 142 | IPR032675 | - | |
Csa07g00420 | 792 | MobiDBLite | consensus disorder prediction | 434 | 461 | - | - | |
Csa07g00420 | 792 | SUPERFAMILY | L domain-like | 54 | 241 | - | - | |
Csa07g00420 | 792 | MobiDBLite | consensus disorder prediction | 435 | 461 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g00420 | Csa-Chr7:3062611 | Csa07g02300 | Csa-Chr7:21374921 | 7.27E-35 | dispersed | |
Csa06g03601 | Csa-Chr6:29085557 | Csa07g00420 | Csa-Chr7:3062611 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
78466 | PF07714 | PK_Tyr_Ser-Thr | 5.50E-42 | CL0016 | Csa | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00420 | - | - | csv:101213734 | 1395.95 |