Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00445 ATGGAGGAATCTCTTCTAGGAGGAGGAGGAGAAAGTAGCGGTAGTTCCACCTCTCGACGTCCGCATGTCAGGTTCCGCCGCCGCTCCGACGCCATCGCATATGGTTCTGCCTACCAGAGAGCGGCTGCTCTTGTGGATCTGGCTGAAGATGGCGTTGGTATACCTGAGAAAATTCTTGATCAGTCAAACTTTCAGAGTGCTGCAAAGCTCTATTTCATTTTTATTAAATTTGATTGGATTTGGTCCTTAAATTTCTTTGCGCTAATAGTCCTAAATTTCTTTGAGAAACCCTTGTGGTGCTTCAAATACGATACACATTCTTGTAACGACAGGGAGTATTTCTTTCTTGGACAGTTGCCGTACTTAACAGCTGTTGAATCTCTTATATATGAGGCTGTGACTCTCATAATACTCATGATACACACTTTTTTCCCAATTTCATATGAAGGTGCCCAGCTTTATTGGACCAATCTCCTGAATCAGTTGAAGGTCATTTGCATAACTATTTTGGTTGCCGATTTTCTTGTTTATACCCTATATTTGTCGCCAGTGGCCTTTGATTATCTTCCATTCAGAGCTGCACCATATATCAGAGTTGTCTTTTTCATCATGAATATCAGGCATCTACGGGAGAGCATTATCATCCTGGCTGGAATGCTTGGCACATACTTGAATGTCTTGGCGCTATGGTTTTTGTTTCTTTTGTTTTCCAGCTGGTTGGCATATGTTATTTTTGAGGATACACAGCAGGGGAAATTAATATTTACTTCTTTTGGAGCCACATTATATCAAATGTTTATTTTGTTCACAACGTCAAATAATCCGAATGTTTGGATACCTGCCTACAAGGCGTCTCGTTGGTATTGCCTCTTTTTTGTGCTTTACGTGCTGTTGGGTGTTTACTTCGTTACAAACTTGATTCTTGCTGTCGTATACGATAGCTTTAAGAGTCAGCTTGCTAAACAAATTTCTGAGATGGATCGGTTGAGGAAAAGTATATTGGCCAAAGCATTTAGTCTCATGGATACAAATAATGTTGGGTATATCAATAAAGAGCAGTGCCTTATGCTTCTTGAAGAACTTAACAGATACAGGTCATTGCCGAAAATATCAAGGGATGATTATGAGTTAATATTCGATGAGCTGGATGACAGTCGTGATTTTAAGATTAATATGAATGAGTTTGATGATCTTTGCAACGCTATAGCCTTGAAGTTCCAGAAGGAGGACATTCCTTCATGGTTTGAAGGGTATCCTTCGGTCTACCATTCAGGTTCTTCAAAAAAGTTGAAAGCATTTGTGCGGAGCCCCAAATTTGGATATGCTGTATCTTTTATCCTCGTACTGAACTTGGTTGCTGTTATTATTGAAACAACACTTGATATAGAAAACAACGTGGGTCAGAAAGCATGGCAAGAACTCGAGTTTGTATTTGGTTGGATATATGTTGTTGAAATGGCTCTAAAAATCTACGCATATGGGTTTATGAATTATTGGAGAGATGGGCAAAATCAATTTGATTTCCTTGTCACGTGGATTATAGTGATTGGAGAAACGATAACTTTTGTGGCACCGAGTGGATTGACTTTTCTTTCAAATGGAGAATGGATTCGCTACCTTCTGATAGCAAGAATGTTACGACTCATAAGGCTCCTAATGCATGTCCGGCAATATCGAGCATTTCTTGCTACCTTCTTAACTCTCATCCCTAGTTTGATGCCATATCTAGGGACTATTTTCTGTGTCCTCTGTCTTTATTGCACTCTTGGTGTGCAGGTCTTTGGAGGCATTGTCAATGCCGGAAATCCTACTTTGTCTAAGACTGAGTTGGACGATGATGACTACCTACTTTTCAATTTCAACGACTATCCTAATGGCATGGTGACCCTGTTCAATTTGCTAGTTATGGGAAACTGGCAAGACTGGATGCAGAGCTACAGGGAATTAACCGGAAGTATTTGGAGCCTTGTTTATTTCATCAGTTTCTACCTAATAACTGTTTTGCTGCTCTTAAATCTGGTTGTAGCTTTTGTCCTGGAGGCATTCTTTGCTGAATTGGATATTGAATCTTCAGAAAATGGTGAAGAACAGGACCAGGACAAAGATAGTAGAAAGGATCGTCCACGTTTCGTTGGCACTAAAACTCGGAGCCGCAAAGTTGACATTCTTCTCCATCATATGTTGAGTGCAGAATTGGACGATAAGGATTCCGATTAG 2217 40.19 MEESLLGGGGESSGSSTSRRPHVRFRRRSDAIAYGSAYQRAAALVDLAEDGVGIPEKILDQSNFQSAAKLYFIFIKFDWIWSLNFFALIVLNFFEKPLWCFKYDTHSCNDREYFFLGQLPYLTAVESLIYEAVTLIILMIHTFFPISYEGAQLYWTNLLNQLKVICITILVADFLVYTLYLSPVAFDYLPFRAAPYIRVVFFIMNIRHLRESIIILAGMLGTYLNVLALWFLFLLFSSWLAYVIFEDTQQGKLIFTSFGATLYQMFILFTTSNNPNVWIPAYKASRWYCLFFVLYVLLGVYFVTNLILAVVYDSFKSQLAKQISEMDRLRKSILAKAFSLMDTNNVGYINKEQCLMLLEELNRYRSLPKISRDDYELIFDELDDSRDFKINMNEFDDLCNAIALKFQKEDIPSWFEGYPSVYHSGSSKKLKAFVRSPKFGYAVSFILVLNLVAVIIETTLDIENNVGQKAWQELEFVFGWIYVVEMALKIYAYGFMNYWRDGQNQFDFLVTWIIVIGETITFVAPSGLTFLSNGEWIRYLLIARMLRLIRLLMHVRQYRAFLATFLTLIPSLMPYLGTIFCVLCLYCTLGVQVFGGIVNAGNPTLSKTELDDDDYLLFNFNDYPNGMVTLFNLLVMGNWQDWMQSYRELTGSIWSLVYFISFYLITVLLLLNLVVAFVLEAFFAELDIESSENGEEQDQDKDSRKDRPRFVGTKTRSRKVDILLHHMLSAELDDKDSD* 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3191225 3208732 + CsaV3_7G004450.1 Csa07g00445 536008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00445 738 Pfam Ion transport protein 99 318 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Csa07g00445 738 Pfam Ion transport protein 439 682 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Csa07g00445 738 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 735 IPR044581 GO:0005245
Csa07g00445 738 SUPERFAMILY Voltage-gated potassium channels 436 682 - -
Csa07g00445 738 SUPERFAMILY EF-hand 325 416 IPR011992 -
Csa07g00445 738 MobiDBLite consensus disorder prediction 1 23 - -
Csa07g00445 738 Gene3D - 317 400 - -
Csa07g00445 738 ProSiteProfiles EF-hand calcium-binding domain profile. 329 364 IPR002048 GO:0005509
Csa07g00445 738 SMART efh_1 333 361 IPR002048 GO:0005509
Csa07g00445 738 SMART efh_1 374 402 IPR002048 GO:0005509
Csa07g00445 738 MobiDBLite consensus disorder prediction 697 713 - -
Csa07g00445 738 CDD EFh 334 398 IPR002048 GO:0005509
Csa07g00445 738 MobiDBLite consensus disorder prediction 693 713 - -
Csa07g00445 738 Gene3D - 562 719 - -
Csa07g00445 738 Gene3D - 208 316 - -
Csa07g00445 738 Gene3D - 428 561 IPR027359 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00445 K16900 - csv:101206980 1391.33