Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00449 ATGTCTTCCTCTTCTTCTTCATCATCCTTTCTTTTCTGCGCCGTAATCTCGATTTTATTATTCATTTCCACCTCTGTTTTTGCTACAGAGTTTGTCTTCAACACCAATTTCACTTCCACTAATACTTTGCTCTTCGGCAACGCCACCATTGATTCTTCCGTTCTTATTCTCACTAGAGATTCCCCTTTCACCATCGGCCGTGCTCTTTACCCTTTCAAAGTTCCCATCCATTTCTCCAATTCTTTATTTTCCTTTGCATCTTCTTTCATTTTCTCTGTTGCCCCTCAACCAAATCTTTTCCCTGGCCATGGATTTGCTTTTCTCTTCACACCCTTTACTGGAATCAATGGAACTAGCTCAGCTCAGAATTTGGGGCTTTTCAATTTCACCAATAATGGGAGCCCCAGTAACCATGTCTTTGCTGTTGAGTTCGATTCGTTTCAAAATCTGGAGTTCAACGACACCAATGATAACCATGTGGGTGTGGATTTGAATTCTCTTGAATCTAATGCTTCCTTTGCCGCTGGGTTTTGGAGTGGACCTGATGATGGAGAATTCAAGGAATTGAAGATCAATAATGGAGAAACTTATCAGGTTTGGATTGAATGTCTTGATTCTTTAGTTAATATCACAATGGCTGAAGTGGGAATGAAAAGGCCTAGAAAACCATTGATATCTCTGTTTGTTGATTTCTCTGGATTGCTTTTGGATGAGATGTATGTAGGATTTACAGCAGCCACTGGGCAATTAGTTCAAAGCCATAGGATATTATCTTGGAGTTTTAGTACCTCCAATTTGTCTATAGGTGATGCTTTATTGATAACAGATTTGCCATCATTTGTTCCTCAAAAAGAGGGCACCATTTTTAACTCAAGAGCTTTCATATTGGGAATAACTTTTGGGGGTGTTGGACTTGTGATTATCTGTTTTATAATCTGTGGTGTTGTAATTATCAAAAGAAGGGGAAGAAAAAAACCAAAGGATGATGAAATTGAAGATTGGGAGTTAGAATATTGGCCGCATAGGTTTGCTTATGAAGATGTTTATGAAGCAACTGGCGGGTTCTCAGAAGCCAATGTAATTGGATCTGGGAGAAACGGGAAGGTCTATAAAGGGACATTAGGGAGATCAAAAGTTGCTGTGAAGAGAATCTCTGTTGAAGCTGAGAGTGGAATGAGGGAATTTGTAGCTGAGATTTCAAGTTTAGGAAGATTAAAGCATAGAAATCTAGTTAAGCTTATAGGATGGTGCAAAAAGGAGAAAGGAAGCTTAATCTTAATGTATGATTACATGGAAAATGGAAGTTTAGACAAGAAACTATTCGAGTGTAACGAGAATGAAAGGCTGAGTTGGGAGAAAAGAATGAAAATTTTAAAAGATGTAGCCACGGGGTTGCTATATCTACACCAAGGTTGGGATTCCAGGGTTCTGCATAGAGACATAAAAGGAAACAACGTGCTACTTGACAAGGACATGAATGCAAGGTTGGGAGATTTTGGGTTGGCTCGAATGCAACCCCATGAAAAAACGGCAGACACAACTCGTGTAATGGGGACTGTCGGGTATATGGCACCAGAGGTGGTTCGAACAGGGAGAGTATCAGCACAAGCAGACGTTTTTGGGTTCGGAGTGTTGGTTTTGGAGGTGGTTTGTGGGAGGAGAGCAGTAGAAGAAGGGAAGCCGTGGTTGATAGATTGGGTAAAAGGATTAATGGAGAGGAATGAGATTGGATTAGCAGTTGATGAGAGATTGAGAGTTGAGGTAATAAGTGGGAATGAGATTGATGAAATGGAGAGAATGGTTTGTTTGGGATTATTATGTGCACATAATGAAGCTGGTGCAAGGCCAACAATGCAACAAGTTGTAAATATTTTGTGTGAGAGAAATGGAAGTGGTTCAAATGATGGATTGTTAAATAGACTAAGATCAACAAGAATACTCTCTGAGATTTCTCAAGGCAAGAATTTTCAGCAAAATCATCCAACGTTTGAAGAAATCAAAACGTCTTCATCTTCAACATCATTCATTGAATCTGATATTTTAAAGAATGACCGGTAG 2058 39.5 MSSSSSSSSFLFCAVISILLFISTSVFATEFVFNTNFTSTNTLLFGNATIDSSVLILTRDSPFTIGRALYPFKVPIHFSNSLFSFASSFIFSVAPQPNLFPGHGFAFLFTPFTGINGTSSAQNLGLFNFTNNGSPSNHVFAVEFDSFQNLEFNDTNDNHVGVDLNSLESNASFAAGFWSGPDDGEFKELKINNGETYQVWIECLDSLVNITMAEVGMKRPRKPLISLFVDFSGLLLDEMYVGFTAATGQLVQSHRILSWSFSTSNLSIGDALLITDLPSFVPQKEGTIFNSRAFILGITFGGVGLVIICFIICGVVIIKRRGRKKPKDDEIEDWELEYWPHRFAYEDVYEATGGFSEANVIGSGRNGKVYKGTLGRSKVAVKRISVEAESGMREFVAEISSLGRLKHRNLVKLIGWCKKEKGSLILMYDYMENGSLDKKLFECNENERLSWEKRMKILKDVATGLLYLHQGWDSRVLHRDIKGNNVLLDKDMNARLGDFGLARMQPHEKTADTTRVMGTVGYMAPEVVRTGRVSAQADVFGFGVLVLEVVCGRRAVEEGKPWLIDWVKGLMERNEIGLAVDERLRVEVISGNEIDEMERMVCLGLLCAHNEAGARPTMQQVVNILCERNGSGSNDGLLNRLRSTRILSEISQGKNFQQNHPTFEEIKTSSSSTSFIESDILKNDR* 686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3219558 3222121 + CsaV3_7G004490.1 Csa07g00449 536012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00449 685 Pfam Protein kinase domain 356 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00449 685 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 20 674 - -
Csa07g00449 685 ProSiteProfiles Protein kinase domain profile. 355 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00449 685 PANTHER - 20 674 - -
Csa07g00449 685 Gene3D - 28 269 - -
Csa07g00449 685 Gene3D Transferase(Phosphotransferase) domain 1 431 636 - -
Csa07g00449 685 SUPERFAMILY Protein kinase-like (PK-like) 331 625 IPR011009 -
Csa07g00449 685 Gene3D Phosphorylase Kinase; domain 1 340 430 - -
Csa07g00449 685 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Csa07g00449 685 CDD STKc_IRAK 361 627 - -
Csa07g00449 685 ProSitePatterns Serine/Threonine protein kinases active-site signature. 476 488 IPR008271 GO:0004672|GO:0006468
Csa07g00449 685 CDD lectin_legume_LecRK_Arcelin_ConA 29 264 IPR001220 GO:0030246
Csa07g00449 685 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 266 IPR013320 -
Csa07g00449 685 SMART serkin_6 355 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00449 685 Pfam Legume lectin domain 29 265 IPR001220 GO:0030246
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa06g01090 Csa07g00449 CCT
Csa06g01090 Csa07g00449 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g01233 Csa-Chr1:7648891 Csa07g00449 Csa-Chr7:3219558 0 dispersed
Csa04g01511 Csa-Chr4:14785016 Csa07g00449 Csa-Chr7:3219558 9.46E-154 dispersed
Csa04g01513 Csa-Chr4:14803634 Csa07g00449 Csa-Chr7:3219558 1.43E-132 dispersed
Csa07g00449 Csa-Chr7:3219558 Csa03g03162 Csa-Chr3:29326367 1.35E-154 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78467 PF00069 Pkinase 2.40E-45 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00449 - - csv:101216388 1293.1