Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00473 ATGGCGTCTATTATTTCTCATCTTTTCATTGTTCTTTCTCTTTTAGCTTTTTCTGTCAATGGGCAACTCTCCTCTGGCTTCTACTCCAAAAGTTGTCCTAGACTTGAATCTATTGTTCGTGCTGGTATGACTAAAGCTGTTAACAAAGAAAAACGTATTGGAGCTTCCATCCTTCGTTTGTTCTTCCACGATTGCTTCGTTAATGGTTGTGATGCTTCTATACTGCTTGATGATACTCCAACAGCTAGAGGTGAAAAAAATGCATTTCCAAATAGAAACTCGGCTAGAGGGTTCGAAGTAATTGACGACATTAAAACTCAAGTGGAAGCTGCTTGCAATGCAACAGTTTCATGTGCTGATATTCTTGCTCTAGCCACGCGTGATGGGGTCGTTTTGCTTGGAGGACCAAATTGGGCTGTACCACTTGGTCGAAAGGACTCGAGGACAGCGAGCGAGAGCGGAGCAAACAACAACCTTCCAGGACCATCCTCTAGCCTCTCAACACTAATATCAATGTTTAACGCTCAAGGCTTCACCCCCCGTGAAATGACAACCCTCTCGGGTGCTCACACCATAGGCATGGGCCAATGTCAATTCTTCCGAACTCGCATCTACAATGAAACCAATATTGATGCCACCTTCGCCACCCAGAGGCAAGCCAACTGCCCATTTAACGGTGGTGACAGCAACTTAGCCCCTCTTGACTCAACCAATACCATGTTTGACAACAAATATTACGTTGACTTAACTAATAAGCGTGGTTTGTTTCATTCGGACCAAGAACTCTTCAATGGTGGTTCACAAGATGCGTTGGTTACGACCTACAGTAAAAATCCCAATCTCTTCAAATCGGATTTTATAAAGGCGATGATCAAAATGGGAAATCTTGGTCCTCCAAGTGGAACAGTCACTGAGATAAGAAAAAATTGTAGGGTGGTTAATTAA 945 43.28 MASIISHLFIVLSLLAFSVNGQLSSGFYSKSCPRLESIVRAGMTKAVNKEKRIGASILRLFFHDCFVNGCDASILLDDTPTARGEKNAFPNRNSARGFEVIDDIKTQVEAACNATVSCADILALATRDGVVLLGGPNWAVPLGRKDSRTASESGANNNLPGPSSSLSTLISMFNAQGFTPREMTTLSGAHTIGMGQCQFFRTRIYNETNIDATFATQRQANCPFNGGDSNLAPLDSTNTMFDNKYYVDLTNKRGLFHSDQELFNGGSQDALVTTYSKNPNLFKSDFIKAMIKMGNLGPPSGTVTEIRKNCRVVN* 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3441475 3443616 + CsaV3_7G005720.1 Csa07g00473 536036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00473 314 MobiDBLite consensus disorder prediction 143 163 - -
Csa07g00473 314 PANTHER PEROXIDASE 15 314 - -
Csa07g00473 314 MobiDBLite consensus disorder prediction 149 163 - -
Csa07g00473 314 Pfam Peroxidase 39 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 SUPERFAMILY Heme-dependent peroxidases 22 314 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 CDD secretory_peroxidase 22 313 IPR033905 GO:0004601|GO:0042744
Csa07g00473 314 Gene3D Peroxidase, domain 2 160 293 - -
Csa07g00473 314 Gene3D - 27 311 - -
Csa07g00473 314 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Csa07g00473 314 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Csa07g00473 314 ProSiteProfiles Plant heme peroxidase family profile. 22 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00473 314 PANTHER PEROXIDASE 72-RELATED 15 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g02902 Csa-Chr1:25468972 Csa07g00473 Csa-Chr7:3441475 3.77E-151 dispersed
Csa06g01605 Csa-Chr6:13815526 Csa07g00473 Csa-Chr7:3441475 4.19E-125 dispersed
Csa06g01607 Csa-Chr6:13836496 Csa07g00473 Csa-Chr7:3441475 6.58E-123 dispersed
Csa06g03285 Csa-Chr6:27565675 Csa07g00473 Csa-Chr7:3441475 1.57E-105 dispersed
Csa07g00473 Csa-Chr7:3441475 Csa04g00543 Csa-Chr4:3606838 1.82E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00473 K00430 - csv:101208932 623.624