Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00483 | ATGAAGCGTTATGTTTACATCAACGACAATGAACCATCAAATGATCTTTATTGCGATAACCGCATTTCGAATAGGAAATACACATTGTTGAACTTTCTCCCAAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATATTTTTTGTTAATTGCATGCCTACAGTTGTGGCCACTTATAACTCCAGTAAATCCTGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCCGTGTCCGCAACAAAAGAGGCATGGGATGATTATAATAGATATTTGTCAGACAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTGGTATGGCTCAGGGAGAATGATGAAGTGCCTTCTGATCTTGTTTTGATTGGTACATCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCGTGCATGGGAATCGATTTTGATCTGTTAAACAAGATCAAGGGAGTTATCGAGTGTCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTCGTTTATTTCCTCCTTTTATCGACAATGATGTGTGTCCTTTAACAATAAAAAACACAATTCTTCAGTCATGTTACTTGCGGAACACAGATTGGGTCTGTGGAGTGGCTGTCTACACAGGCAATGAAACCAAGCTTGGGATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATCGACAAGTTAACTGGTGCTATATTTGTTTTTCAACTTGTGGTGGTGGTTGTTCTGGGTATAGCTGGCAATGTTTGGAAGGATTCTGAAGCTCGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGCCCATGGTATGAGCTTTTGGTCATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCTATTTCCATTAAGGTATCTCTGGATCTTGTTAAGAGCTTGTATGCAAAATTTATCGATTGGGACTATGAAATGATTGACTGTGAGAGTGGTATTCCTTCCCATGCTACGAATACAGCAATAAGTGAGGACCTGGGTCAAGTTGAGTACATTTTGACAGATAAAACCGGTACTCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAATGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAACTAGTCAATGCCATTGCAAACAGCTCTCCGGATGTTTTAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAAAAGCAAAAGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTTGTGAATGCTGCTGCTTATTTGCATATGGTATTTGTCAATAAGAGTGCTACTATTCTTGAAATTCAGTTTAATGGAATGCTGAATAGATATGAGCTCCTAGATACTCTGGAATTCACATCTGAACGGAAAAGAATGTCTGTGGTTGTTAAAGATTGTCAGAATGGGAAGATTGTTCTCATGTCTAAAGGAGCAGATGAAGCTATACTTCCTTATGCTTATGCTGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCACAACTTGGTCTCCGCACATTATGTTTGGCTTGGCGTGAACTAGAGGAAGATGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCACACTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGTCAAAGATTAGAGCGAAACTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGCGTCCCCGAAACAATTGAAACATTGAGAAGAGCAGGGATAAATTTCTGGATGCTGACTGGAGACAAGCAGAACACTGCCATTCAGATAGCTCTTTTATGCAACTTTATTTCACCAGAGCCCAAAGGACAGTTATTGTTAATAGATGGAAAAACAGAGGATGAAGTTTGCAGAAGTTTGGAGAGAGTTGTTCTAACTATGAAGACCACAACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGTAGGGCTTTCACTGAATTAGCAATACTATCAAGAACAGCAATATGTTGTCGTGTGACTCCATCACAGAAGGCTCAGCTTGTGGAACTCTTAAAATCGTGTGATTATAGAACATTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAGCAAGCTGATATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCCAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTGATTCTAGTTCATGGACGATACTCATACAACCGTACAGCATTCTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTCTTTAATTCTGTTAGCCTGATGGCTTACAATGTTTTCTATACTAGTATTCCTGTATTAGTTAGCGTTCTTGACAAAGATCTCAGTGAAGAAACGGTGATGCAACATCCTCAGATTTTGTTTTATTGCCAAGCTGGGAGGATTTTAAATCCCAGCACATTTGCTGGATGGTTTGGTCGATCTCTATTTCATGCTGTTGTCGTGTTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAAGTCTCAATGGTGGCACTATCTGGGTGCATTTGGTTACAAGCTTTTGTAGTGACTTTGGAGACCAATTCATTCACAATATTGCAGCATCTTGCCATATGGGGGAATTTAGCTGCATTTTACGTAATTAATTGGATCTTCAGCGCCATTCCTTCATCGGGGATGTATACAATAATGTTTCGCTTATGCGGACAACCTTCTTATTGGATAACCATATTTCTAATAGTAGGAGTTGGAATGGGGCCACTTTTAGCAATCAAATACTTCAGATATACATACAGACCAAGCAAAATCAACACACTTCAACAAGCTGAACGTTTGGGTGGGCCGATTCTGTCGCTAAAAAACATTGAGCATCAGCCTCGGCCCATTGAGAAAGAAGTTTCTCCAATCTCAATAACTCAGCCCAAAAATAGAAACACAGTTTACGAACCTTTATTATCAGACTCTCCCACTGCCACTCGAAGATCTCTTGCATCTTCTTCCTCCTCCTTTGATTTCTTTCAGACACCACCCCCAAGTAGTTATTCAAGAAATAAGGATAATTAG | 3312 | 39.86 | MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIPSHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAIANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATILEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDSPTATRRSLASSSSSFDFFQTPPPSSYSRNKDN* | 1104 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3494288 | 3504836 | + | CsaV3_7G005820.1 | Csa07g00483 | 536046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00483 | 1103 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1100 | - | - | |
Csa07g00483 | 1103 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - | |
Csa07g00483 | 1103 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 717 | 834 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Csa07g00483 | 1103 | Gene3D | - | 445 | 582 | IPR023299 | GO:0000166 | |
Csa07g00483 | 1103 | Gene3D | - | 602 | 790 | IPR023214 | - | |
Csa07g00483 | 1103 | SUPERFAMILY | Calcium ATPase, transduction domain A | 100 | 248 | IPR008250 | - | |
Csa07g00483 | 1103 | PRINTS | P-type cation-transporting ATPase superfamily signature | 152 | 166 | - | - | |
Csa07g00483 | 1103 | PRINTS | P-type cation-transporting ATPase superfamily signature | 379 | 393 | - | - | |
Csa07g00483 | 1103 | PRINTS | P-type cation-transporting ATPase superfamily signature | 628 | 638 | - | - | |
Csa07g00483 | 1103 | PRINTS | P-type cation-transporting ATPase superfamily signature | 750 | 769 | - | - | |
Csa07g00483 | 1103 | Pfam | Phospholipid-translocating ATPase N-terminal | 5 | 70 | IPR032631 | - | |
Csa07g00483 | 1103 | SFLD | p-type atpase | 362 | 801 | IPR044492 | - | |
Csa07g00483 | 1103 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 16 | 1016 | IPR023298 | - | |
Csa07g00483 | 1103 | SUPERFAMILY | HAD-like | 374 | 805 | IPR036412 | - | |
Csa07g00483 | 1103 | Gene3D | - | 75 | 251 | - | - | |
Csa07g00483 | 1103 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 386 | 573 | IPR023299 | GO:0000166 | |
Csa07g00483 | 1103 | Pfam | Cation transport ATPase (P-type) | 436 | 532 | - | - | |
Csa07g00483 | 1103 | Pfam | E1-E2 ATPase | 99 | 293 | - | - | |
Csa07g00483 | 1103 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 417 | 1023 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Csa07g00483 | 1103 | MobiDBLite | consensus disorder prediction | 1060 | 1103 | - | - | |
Csa07g00483 | 1103 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 778 | 1017 | IPR032630 | - | |
Csa07g00483 | 1103 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 381 | 387 | IPR018303 | - | |
Csa07g00483 | 1103 | SFLD | Haloacid Dehalogenase | 362 | 801 | - | - | |
Csa07g00483 | 1103 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 385 | 1100 | - | - | |
Csa07g00483 | 1103 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 12 | 330 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g00483 | Csa-Chr7:3494288 | Csa07g02379 | Csa-Chr7:21930097 | 5.84E-159 | dispersed | |
Csa07g00483 | Csa-Chr7:3494288 | Csa01g00638 | Csa-Chr1:4052892 | 3.81E-179 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00483 | K01530 | - | csv:101210900 | 2149.78 |