Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00521 ATGGCAAAGTTGATGATTCTTCTCAATCTCTTGTTATTCCTTGGTTGCTTTGCTTCCATTTCTCAAGCCCAATTGAAATTTGGATTCTATGCTCGATCTTGTCCTACCGCCAAATCCATTGTCCGTTCCGTTGTGAACGACGCCATTCGAAATGATGCCACCATGGCTGCTGTATTGCTCCGCCTCCATTTTCACGATTGCTTTGTAGAGGGTTGTGATGGTTCGATCTTGGTCGACAATGGGGCAAGGTCTGAGAAACTTGCTTTCGGGCATCAAGGGGTGCGGGGGTTTGATGTAATAGAAAAAGCCAAGAGAGAATTGGAAGCACAGTGTCCTGGACTTGTTTCTTGTTCTGACATCGTAGCTATGGCTGCTAGAGATGCCATTGTTACGGCAAATGGCCCGGACTATGATATTCCAACCGGCCGGAGAGACGGTAGAGTTTCGGATGTATCTCTGGCGAGTGATCTGCCGGATGTGAGTGATTCAATTGACGTTTTGAAGAGGAAATTTGCAGAGAAAGGGATGAATGAAAAGGACTTGGTTTTACTATCAGCTGCCCATACAATCGGAACCACTGCATGCTTCTTCATGACAAATCGCCTCTACAACTTCCCGGGCGGCGGATCAGACCCAAACATAAACCCGGCGCTGCTACCGGAGCTGCAGTCGCAATGTCCTAGAAATGGCGACGTCAATGTTCGACTTGGCATCGACCGTGACACTCCCCGCACATTCGACATCAGCATTTTTCAAAACATAAGAAGCGGCTTTGCCGTCCTCGCCTCCGATGCTAGTCTAAACAACGACCCATCGACCCGAGCCATATTGGACTCGTACCTTAGCCCTCTCGCCCCCGTTCTTGGCCCCTCATTTCAACGTGATTTTGTTACCTCCATTGTGAGAATGGGGCAGATTGGGACTAAAACTGGCTCTGAAGGAGAGATTCGAAGGGTTTGTTCTGCTTTTAACTAA 975 48.41 MAKLMILLNLLLFLGCFASISQAQLKFGFYARSCPTAKSIVRSVVNDAIRNDATMAAVLLRLHFHDCFVEGCDGSILVDNGARSEKLAFGHQGVRGFDVIEKAKRELEAQCPGLVSCSDIVAMAARDAIVTANGPDYDIPTGRRDGRVSDVSLASDLPDVSDSIDVLKRKFAEKGMNEKDLVLLSAAHTIGTTACFFMTNRLYNFPGGGSDPNINPALLPELQSQCPRNGDVNVRLGIDRDTPRTFDISIFQNIRSGFAVLASDASLNNDPSTRAILDSYLSPLAPVLGPSFQRDFVTSIVRMGQIGTKTGSEGEIRRVCSAFN* 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3786980 3792753 + CsaV3_7G006200.1 Csa07g00521 536084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00521 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Csa07g00521 324 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Csa07g00521 324 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601|GO:0042744
Csa07g00521 324 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PANTHER PEROXIDASE 25-RELATED 24 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PANTHER PEROXIDASE 43 24 321 - -
Csa07g00521 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 Gene3D Peroxidase, domain 2 158 303 - -
Csa07g00521 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Csa07g00521 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Csa07g00521 324 Gene3D - 28 324 - -
Csa07g00521 324 Pfam Peroxidase 41 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g00521 Csa-Chr7:3786980 Csa07g00538 Csa-Chr7:3952110 1.90E-101 dispersed
Csa07g00539 Csa-Chr7:3955029 Csa07g00521 Csa-Chr7:3786980 8.77E-68 dispersed
Csa07g00521 Csa-Chr7:3786980 Csa02g02696 Csa-Chr2:23513034 1.01E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00521 K00430 - csv:101221831 633.254