Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00538 | ATGCAAACCATCGTCTCAAAATTAACAAGCATATCTCTCCTCTCTTATACTTCTAATCTGATGACAAAACTTATTGGTTTTACGTCAATGCTTCTCCCACTCATGTCGTTTATGATTATTGTGTTGTTATTCACTGTTGTGAACGGTCAAGGCACCCGCATTGGTTTCTACTCCAGCTCTTGCCCTCAAGCTGAGTCCATTGTTGCATCTACTGTACGATCTCATTTTCAATCTGATCCTAAGATTGCTCCAGGTTTATTGAGAATGCACTTCCACGATTGCTTCGTTCGGGGTTGTGATGCCTCTGTGCTCCTTGCTGGCTCTAACAGTGAGAGGACTGCACTACCAAACCTTTCGTTAAATGGGTTCGAAGTGATTGACGATGCTAAATCTCAACTTGAAGCTGCTTGTCCTGGTGTTGTATCTTGCGCTGACATTCTTGCTCTAGCTGCTCGTGACTCAGTAGTTTTGACAAGTGGAATACGTTGGGGAGTGCCCACAGGACGAAGAGATGGGACAATTTCGGTGGCTTCAGAAGCTAACAACTTGCCTGGATTTACAGATTCTATCGAGGCTCAAAAGAAACAATTTACTGATAAAGGTCTCAACACTCAAGACCTTGTCACTCTCGTGGGTGGACACACAATAGGCACAACACAATGCCAATTTTTCAGATACAGACTCTTCAACTTCACAGCAGCAGGCGGTCCAGATCCAACGATGGACCCAGCCTTCGTGACTCAAATGCAGGCATTGTGTCCTCAAAACGGAGACGGAACCCGTAGGGTCGCGCTGGACACGGGCAGCGTCGGTCGGTTTGACACAACCTTCTTCTCAAACTTAAGGAACGGACGTGGGGTTTTGGAGTCGGATCAGAAGCTATGGACTGACGCTTCCACTCGTACTTTTGTACAACGGTATTTGGGTTTGAGAGGCGTTTTGGGTTTGACCTTCAATCTTGAGTTTGGGAAATCTATGGTGAAGATGAGTAACATTGAAGTTAAAACTGGAAATCAAGGAGAAATTCGTAAAGTTTGTTCTGCAGTTAATTAA | 1053 | 44.92 | MQTIVSKLTSISLLSYTSNLMTKLIGFTSMLLPLMSFMIIVLLFTVVNGQGTRIGFYSSSCPQAESIVASTVRSHFQSDPKIAPGLLRMHFHDCFVRGCDASVLLAGSNSERTALPNLSLNGFEVIDDAKSQLEAACPGVVSCADILALAARDSVVLTSGIRWGVPTGRRDGTISVASEANNLPGFTDSIEAQKKQFTDKGLNTQDLVTLVGGHTIGTTQCQFFRYRLFNFTAAGGPDPTMDPAFVTQMQALCPQNGDGTRRVALDTGSVGRFDTTFFSNLRNGRGVLESDQKLWTDASTRTFVQRYLGLRGVLGLTFNLEFGKSMVKMSNIEVKTGNQGEIRKVCSAVN* | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3952110 | 3954443 | + | CsaV3_7G006370.1 | Csa07g00538 | 536101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00538 | 350 | Gene3D | - | 55 | 350 | - | - | |
Csa07g00538 | 350 | Gene3D | Peroxidase, domain 2 | 184 | 329 | - | - | |
Csa07g00538 | 350 | Pfam | Peroxidase | 68 | 307 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | ProSiteProfiles | Plant heme peroxidase family profile. | 51 | 350 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PANTHER | PEROXIDASE 25-RELATED | 39 | 348 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | CDD | secretory_peroxidase | 53 | 349 | IPR033905 | GO:0004601|GO:0042744 | |
Csa07g00538 | 350 | PANTHER | PEROXIDASE | 39 | 348 | - | - | |
Csa07g00538 | 350 | ProSitePatterns | Peroxidases active site signature. | 83 | 94 | IPR019794 | GO:0004601 | |
Csa07g00538 | 350 | SUPERFAMILY | Heme-dependent peroxidases | 53 | 350 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Haem peroxidase superfamily signature | 83 | 97 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Haem peroxidase superfamily signature | 141 | 158 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Haem peroxidase superfamily signature | 159 | 171 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Haem peroxidase superfamily signature | 206 | 221 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Haem peroxidase superfamily signature | 266 | 281 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 206 | 216 | IPR019793 | - | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 61 | 80 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 85 | 105 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 121 | 134 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 140 | 150 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 159 | 174 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 205 | 217 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 264 | 279 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 280 | 297 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00538 | 350 | PRINTS | Plant peroxidase signature | 324 | 337 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa01g01488 | Csa-Chr1:10618560 | Csa07g00538 | Csa-Chr7:3952110 | 2.03E-80 | dispersed | |
Csa01g02004 | Csa-Chr1:16873513 | Csa07g00538 | Csa-Chr7:3952110 | 6.63E-83 | dispersed | |
Csa01g02009 | Csa-Chr1:16920108 | Csa07g00538 | Csa-Chr7:3952110 | 2.20E-129 | dispersed | |
Csa06g00563 | Csa-Chr6:4818821 | Csa07g00538 | Csa-Chr7:3952110 | 6.93E-85 | dispersed | |
Csa07g00521 | Csa-Chr7:3786980 | Csa07g00538 | Csa-Chr7:3952110 | 1.90E-101 | dispersed | |
Csa07g00538 | Csa-Chr7:3952110 | Csa07g01953 | Csa-Chr7:19247809 | 2.94E-94 | dispersed | |
Csa07g01199 | Csa-Chr7:11789238 | Csa07g00538 | Csa-Chr7:3952110 | 7.28E-77 | dispersed | |
Csa07g00538 | Csa-Chr7:3952110 | Csa07g00539 | Csa-Chr7:3955029 | 4.55E-116 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00538 | K00430 | - | csv:101217567 | 694.501 |