Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00539 | ATGGCGAAAGTTGGTTTCATTTTAATTGTATACGTAGTGGTGGTGTTGCATAGCAACGCTGTGCATGGCCAAGGCACACGCCTTGGCTTTTATCGTGCCACGTGCCCACAAGTCGAATTCATCGTTAGATCCACGGTTCGATCTCATTTTCAATTAGATCCATCGATCGCTCCTGGGTTGTTAAGAATGCATTCACATGATTGCTTCGTCCGAGGGTGTGATGCTTCTGTGCTTCTTGCTGGTCCCAATTCTGAGAGGACGGCTGTGCCTAACCGTGGAAGAAGTTGGGAAGTTCCGACGGGACGAAGAGATGGCAGAGTTTCATTAGTTTCCGAGGTGAAGTTGCCTGGTTTTTCAGATTCCATTGAAGTTCAAAAGGAGAAGTTCAGATCTATGGGGCTCAACACACATGACCTCGTAACTCTCGCAGGTGCCCATACCATTGGTACTGCATCGTGTCGTTTTTTCAGTTATAGACTCTACAACTTCACAACAGTCACTGAAACCGGTGCTGACCCAACTCTTAATCCATCACTCGTCGAACGACTACGAGATGTTTGCCCTGTAGACGGAGATAGCTCAAACAGATTTGAACTCGACATCGATAGTGCAGAAAAGTTTGACGTATCGTTCTACAAAAACTTGAGACAAGGAGGAGGGATCTTAGAGTCGGATCAAATGTTGTGGAACGATGATTCTACTCGCCCTATCATCCAACACTATTTGAGTTTAAAAGGTTTAGTAGGGCGTTCAAGCTTTAAAGTTGAGTTTGGAAGATCGATGGTTAAAATGAGCAATGCACAAGTTAAAACTGGCCTTCTTGGTGAAATTCGAAGGGTTTGCTCTAAGGTTAATAATTGA | 861 | 44.6 | MAKVGFILIVYVVVVLHSNAVHGQGTRLGFYRATCPQVEFIVRSTVRSHFQLDPSIAPGLLRMHSHDCFVRGCDASVLLAGPNSERTAVPNRGRSWEVPTGRRDGRVSLVSEVKLPGFSDSIEVQKEKFRSMGLNTHDLVTLAGAHTIGTASCRFFSYRLYNFTTVTETGADPTLNPSLVERLRDVCPVDGDSSNRFELDIDSAEKFDVSFYKNLRQGGGILESDQMLWNDDSTRPIIQHYLSLKGLVGRSSFKVEFGRSMVKMSNAQVKTGLLGEIRRVCSKVNN* | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3955029 | 3956472 | - | CsaV3_7G006380.1 | Csa07g00539 | 536102 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00539 | 286 | Gene3D | - | 27 | 92 | - | - | |
Csa07g00539 | 286 | PRINTS | Plant peroxidase signature | 35 | 54 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PRINTS | Plant peroxidase signature | 59 | 79 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PRINTS | Plant peroxidase signature | 259 | 272 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | ProSiteProfiles | Plant heme peroxidase family profile. | 25 | 285 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | Gene3D | Peroxidase, domain 2 | 116 | 264 | - | - | |
Csa07g00539 | 286 | PANTHER | PEROXIDASE | 92 | 283 | - | - | |
Csa07g00539 | 286 | PANTHER | PEROXIDASE | 6 | 91 | - | - | |
Csa07g00539 | 286 | CDD | secretory_peroxidase | 27 | 284 | IPR033905 | GO:0004601|GO:0042744 | |
Csa07g00539 | 286 | PRINTS | Haem peroxidase superfamily signature | 200 | 215 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PRINTS | Haem peroxidase superfamily signature | 92 | 104 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PRINTS | Haem peroxidase superfamily signature | 57 | 71 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PRINTS | Haem peroxidase superfamily signature | 138 | 153 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | Gene3D | - | 93 | 285 | - | - | |
Csa07g00539 | 286 | PANTHER | PEROXIDASE 25-RELATED | 92 | 283 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | PANTHER | PEROXIDASE 25-RELATED | 6 | 91 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | Pfam | Peroxidase | 93 | 242 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | SUPERFAMILY | Heme-dependent peroxidases | 27 | 285 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Csa07g00539 | 286 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 138 | 148 | IPR019793 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g00539 | Csa-Chr7:3955029 | Csa07g00521 | Csa-Chr7:3786980 | 8.77E-68 | dispersed | |
Csa07g00538 | Csa-Chr7:3952110 | Csa07g00539 | Csa-Chr7:3955029 | 4.55E-116 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00539 | K00430 | - | csv:101202985 | 542.347 |