Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00613 ATGGTTTCTGGAGATATTTTGGGTGCTCGAATCACTTACAATGGAACATTGGGGAGATTGGATGTTACGCTGAAAGATCCTCAGGTTCCAAATGAGTCGATTACGTTGAATCTTACTGATGTTCCCATTGATGTGAAGAGAATTCTTCCGGCTAGAGTGATCGTTGGCTTTTCTTCATCAACGGGTCAGTCAATCCCAATTCAAGCAATTAGAAGTTGGAATTTCACATCGAGTTTGGATTTGATTGATGTAGCTGGAATTGTTGAGGAAAAATCCAAATTGTGGATTGTGGGTCTGGTTATTGGATTGGTTGGCTTGGTTTTTCTGTCTGGATTCTTATTTGTTGTTTGGTGGAGAAGAACAAAGAGGAAACAGAGAGAAAAAGAAGAGAGAGATGGTGATGATGATGATGATGATGATTTTGGTGATGAAGAAATTAGTATGGTGGAGAATGTTGTTGATGAAGAGTTCATTAGAGGAACAGGACCAAAGAGATTTGCTTATAAGGAACTTGTTAAAGCAACAAACAATTTTTCTCAAGAAGGAAAACTTGGGCAAGGAGGTTTTGGTGGTGTTTACAAAGGTTTTGTGACAGAACTAAACATGGAAATAGCAGCAAAGAAGATATCAAGCACTTCCAAGCAAGGAAAAAAGGAGTACATCTCTGAAGTCAACATTATAAGCCGTTTGCGACATCGAAATCTTGTTCAACTCGTTGGATACAGTCACGAACGCGGCCATTTCGTACTCGTTTATGAGTACATGCCGAACGGAAGCTTAGATTCCCATTTGTTCGGGAAAAAATCACGCCTCTCCTGGCCTTTAAGATACAAAATAGCCCACGGCATAGCCTCTGCCTTGCTCTACCTCCACGAGGAATGGGAACAATGCGTTGTCCACAGAGACATCAAGTCAAGCAATGTGATGTTAGACTCAAACTTCAACGCTAAAGTAGGTGATTTTGGTTTAGCCAGACTTGTTGATCATGGTCTCCGCTCGCCAACGACAGTCGTAGCAGGCACGATGGGCTACCTAGCTCCAGAGTCCCTTCTCACAAGCAAAGCGAGTAAGGAATCAGACGTGTTTAGTTTCGGGGTGGTGGCATTGGAGATAGCCTGTGGGAGAAAAGCAGTGGAACACAATAAAGAAGAAGAAGAAAAGATTAGTTTGGTGAATTGGGTTTGGGGATTGTATGGACAAGGAAGACTTCTTGAAGCAGTTGATAAGGCATTGAATGGAGAGTTCAATCAAGAAGAAATGGTGCGTTTAATGACTGTGGGGCTATGGTGTGCACACCCAAATCATAACCTAAGAGCTTCCATAAGGCAAGCAATTCAAGTGCTGAACTTTGAAGCCCCTTTGCCTAAACTCCCAACACAAATGCCTGTGCCTATGTTCTATGCTCCCACAGCTCCCAATGAAAACCCTTTTTCATATATTTACTCAACCAACACAAACTCTCAAGTATCATTGCAATCTGATACATCTCAGCCTGTTTCCTCCAAATCATCCTTGTGA 1518 42.09 MVSGDILGARITYNGTLGRLDVTLKDPQVPNESITLNLTDVPIDVKRILPARVIVGFSSSTGQSIPIQAIRSWNFTSSLDLIDVAGIVEEKSKLWIVGLVIGLVGLVFLSGFLFVVWWRRTKRKQREKEERDGDDDDDDDFGDEEISMVENVVDEEFIRGTGPKRFAYKELVKATNNFSQEGKLGQGGFGGVYKGFVTELNMEIAAKKISSTSKQGKKEYISEVNIISRLRHRNLVQLVGYSHERGHFVLVYEYMPNGSLDSHLFGKKSRLSWPLRYKIAHGIASALLYLHEEWEQCVVHRDIKSSNVMLDSNFNAKVGDFGLARLVDHGLRSPTTVVAGTMGYLAPESLLTSKASKESDVFSFGVVALEIACGRKAVEHNKEEEEKISLVNWVWGLYGQGRLLEAVDKALNGEFNQEEMVRLMTVGLWCAHPNHNLRASIRQAIQVLNFEAPLPKLPTQMPVPMFYAPTAPNENPFSYIYSTNTNSQVSLQSDTSQPVSSKSSL* 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4466391 4469312 + CsaV3_7G007120.1 Csa07g00613 536176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00613 505 Gene3D Phosphorylase Kinase; domain 1 163 254 - -
Csa07g00613 505 PANTHER - 1 505 - -
Csa07g00613 505 Gene3D - 1 91 - -
Csa07g00613 505 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 199 IPR013320 -
Csa07g00613 505 Pfam Legume lectin domain 3 78 IPR001220 GO:0030246
Csa07g00613 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Csa07g00613 505 Pfam Protein kinase domain 179 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00613 505 ProSiteProfiles Protein kinase domain profile. 178 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00613 505 Gene3D Transferase(Phosphotransferase) domain 1 255 469 - -
Csa07g00613 505 SMART serkin_6 178 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00613 505 ProSitePatterns Protein kinases ATP-binding region signature. 184 208 IPR017441 GO:0005524
Csa07g00613 505 SUPERFAMILY Protein kinase-like (PK-like) 162 485 IPR011009 -
Csa07g00613 505 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IX.1-LIKE 1 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g01875 Csa-Chr6:16921375 Csa07g00613 Csa-Chr7:4466391 6.57E-14 dispersed
Csa07g00613 Csa-Chr7:4466391 Csa07g00619 Csa-Chr7:4495826 6.80E-155 dispersed
Csa07g00613 Csa-Chr7:4466391 Csa07g00618 Csa-Chr7:4492517 1.77E-151 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78473 PF00069 Pkinase 1.20E-49 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00613 - - csv:101205412 922.924