Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00672 ATGCGGGGACAACATTCTCACCCACTCAAGTCGGGTCCCGCCGGACCCGATGACGAAAACGAACCAGTTCGCTCTTATATCGCTGGAATGAACATTCCCTTAGGCCCCGGAATTCGGAAGAAGGGAACTGGAGTCCGACCATGGCTACTTCTGGACTCGACCGGCGGAGCTCAGGTGGTTGAGGCCGGAAAACATGCGATTATGCGGCGGACCGGTCTGCCGGCGCGGGACCTTCGGATTCTCGATCCGTTGCTCTCGTATCCATCTACGGTTCTTGGCCGTGAGAAAGCGATTGTGATCAATTTGGAGCACATCAAAGCAATTATCACTGCTCAAGATGTGTTCGTGTTGAATGCTAGGGATCCGTCTGTAACCCCCTTTGTGGATGAGCTTCAAAGGCGGGTATTGCGGCACCATCAAGCCACTAAGGCCTCTCAGGAGGGCGTTAGCGATGATTCTAATTGGAGGAATCTGTATGACTTAGAGGAGCCTAGATCAAGGACTCAAAGTCCTCCTTCATACCAAGGATTTCCACAGGCTGAAGAGGAGGAGGGGAAGGAAAGCATGAAACAAGGTCTTGAAAATCGGGAGGGATTGAAGGTTCTTCCTTTTGAGTTTGTTGCTTTGGAGGCATGCCTTGAAGCTGCTTGCAGTTGCTTAGAAAGCGAAGCAGATACATTGGAGCTAGAGGCTCACCCAGCTTTGGATAAGCTGACTTCTAAGATCAGTACTCTCAATTTGGAACGAGTGCGTCAGATCAAAAGTCGACTGGTTGCAATAACTGGACGAGTTCAAAAGGTGCGGGACGAATTAGAACACTTACTAGATGATGATGAGGATATGGCTGAGATGTACTTAACAGAGAAGATGGTTCAGCAACAACTTGAGAACTCTTCCACTTCCTCAATTCCTGAGAGAGATGACATGGAAGAAGACGATCAGCAATTAGGCAAAGATGACAGGCACGAGTCATGTCTTATGTCACCTTAA 990 49.09 MRGQHSHPLKSGPAGPDDENEPVRSYIAGMNIPLGPGIRKKGTGVRPWLLLDSTGGAQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGREKAIVINLEHIKAIITAQDVFVLNARDPSVTPFVDELQRRVLRHHQATKASQEGVSDDSNWRNLYDLEEPRSRTQSPPSYQGFPQAEEEEGKESMKQGLENREGLKVLPFEFVALEACLEAACSCLESEADTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKMVQQQLENSSTSSIPERDDMEEDDQQLGKDDRHESCLMSP* 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4803779 4805798 + CsaV3_7G007710.1 Csa07g00672 536235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00672 329 Coils Coil 210 230 - -
Csa07g00672 329 MobiDBLite consensus disorder prediction 315 329 - -
Csa07g00672 329 Gene3D Magnesium transport protein CorA, transmembrane region 179 325 - -
Csa07g00672 329 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 24 312 IPR039204 -
Csa07g00672 329 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 24 312 - -
Csa07g00672 329 Gene3D - 38 119 - -
Csa07g00672 329 MobiDBLite consensus disorder prediction 1 23 - -
Csa07g00672 329 MobiDBLite consensus disorder prediction 162 191 - -
Csa07g00672 329 MobiDBLite consensus disorder prediction 292 329 - -
Csa07g00672 329 CDD Mrs2_Mfm1p-like 48 311 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g02083 Csa-Chr6:18604466 Csa07g00672 Csa-Chr7:4803779 2.83E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00672 - - csv:101213978 597.045