Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00698 ATGATGTTGAGGTCGTGTTTCCGGCCGCTCGAGCGGTTTCTTGGTCGGTGGAGTGGTGATGGATTGCTCTGGCACTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCGATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTTTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGGCCTGAGGCTTCTCGTTTTGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAAGATTTTTTGCGTTTGGTTAAACGGGCTTTGCCTGCAAAGCCGCAGATCGCTTCAGTCGGATCATGCTGTCTTGTAGGCGCGATTTCAAATACAAAGTTGTACGTTGCGAATCTAGGTGATTCGAGAGCTGTGCTTGGCCGTAGTGGTTCCGGGAGTAAAATAACACCGGTAGTTGCAGAACGATTGTCCACTGATCACAATGTTGGCGTAGATGAAGTTAGGAAAGAAGTTATAGCACTTCATCCCGATGATGCTCATATAGTTGTCTACACCCGTGGAGTATGGAGAATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGACGTTTATTTAAAGAAACCTGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGACCCCCGTTCCTTTAAAACGACCAGTAATGACTGCAGAACCATCGATCCTAACACGAGAGCTTAAACCCCAAGACTTATTCCTCATCTTCGCATCAGATGGCCTATGGGAACAACTAACCGATGAAGCTGCAGTGGAAATAGTTTTCAAGAACCCAAGAGCTGGGATTGCAAAGAGATTAGTAAGTGCTGCCCTCCACGAGGCAGCGAAGAAGCGGGAAATGAGATACTCTGACTTAAAGAAGATCGAAAAGGGGATTCGACGTCATTTCCACGACGACATCACCGTCGTCGTCGTGTATCTCGACCACAACAGAAGCTCAAACACCAACCGAACAAAGAATGCCATCGCGGGGTACACTAGTGCACCTGTTGACATATTTTCTCTCAACTCAAACTATGAAGCTGAGGAAGAAATTTCAGACAATGTTTTGAAAAATTGA 1149 45.17 MMLRSCFRPLERFLGRWSGDGLLWHSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEDFLRLVKRALPAKPQIASVGSCCLVGAISNTKLYVANLGDSRAVLGRSGSGSKITPVVAERLSTDHNVGVDEVRKEVIALHPDDAHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGTPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVSAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVVVVYLDHNRSSNTNRTKNAIAGYTSAPVDIFSLNSNYEAEEEISDNVLKN* 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4993281 4996177 + CsaV3_7G007970.1 Csa07g00698 536261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00698 382 CDD PP2Cc 42 337 IPR001932 -
Csa07g00698 382 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Csa07g00698 382 Gene3D - 25 349 IPR036457 -
Csa07g00698 382 SUPERFAMILY PP2C-like 42 338 IPR036457 -
Csa07g00698 382 SMART PP2C_4 25 335 IPR001932 -
Csa07g00698 382 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 372 - -
Csa07g00698 382 PANTHER ALPHABET, ISOFORM E-RELATED 4 372 - -
Csa07g00698 382 Pfam Protein phosphatase 2C 56 308 IPR001932 -
Csa07g00698 382 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g03575 Csa-Chr3:31923090 Csa07g00698 Csa-Chr7:4993281 1.13E-150 dispersed
Csa07g00118 Csa-Chr7:1052155 Csa07g00698 Csa-Chr7:4993281 4.34E-103 dispersed
Csa07g00698 Csa-Chr7:4993281 Csa02g01405 Csa-Chr2:13428092 3.28E-146 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00698 - K01102 csv:101216862 764.222