Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00705 | ATGGCGCACTTTTATCTAAAATTTCGCGACGAACTCCTACTGAGGCGGCCGCTTAGATTTGAAATTCATGAAAATGGCGGCATTTCTCCCTCCTCATCCCCCTCTATTTCACCACAACTCCATTCTTCCACCAATGGATTCTCCGGCATTTACTATCCCCTCCTTCCTTTCCCTTCTCCGGCTAACTTCGCAACTTCCACATTCTCCCTCCTCCCCTTCGGAATCAGATTATTCCCGTCTCCCATGGACTCGTCGGAGTACTACAAACCATCCTTCCCAACCTCCAAGAAACGCGACTCGGAGGAACACTCTTTGCAGCAGGCTACTGCCAATAAGAGACCCGTGCTTGGCGAGATCACTAACTCGTTCATCTTCAGTTCGAGTCAGTGCTCCTTTTCTGACCAGGAGATGGCGGATAAGGATCTGGACAAGGAGGAACTTCCTGAAGTACGGTCTGTTGATTGTCCCGAGAAATCTGGCTCGTCGTTGGGCATTTATAACCACCTTCGATCTCTCGAGATGGAATTAAACATGAAGTTCCTACCCAACAACATAGAAAAGGCTCGTAATGATGATTCCTGTTCAACTTTCACTCGTTGGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCAGACACCCTATATCTCACCATATCACATGTTGACAGATACTTATCCTGGCATGTTGTTGACAAAAGCAAGCTACAACTTATTGGTGTTTGTTGCATGCTAATTGCATCGAAGCATGAAGAGATCAGTCCTCCACATGTTGAAGATTTCTGTTATATAACAGATAACACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACACAGATTCTTGGCATGTGAAGGTGCTCCCACCGTAAAAGTTTTCCTCAGAATATTTACGAAAGTTTCTTTAGAAAATTGGAAGGCTCCAGATTTGCAATTTGAGTTGTTGTGTTGTTATCTTGCGGAGCTAAGTTTGTTAGATCACCGTTGTGCACAAATATTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGGAACATCCTTGGTGTTTAGCACTACAACGTTACTCCGGTTACAGGGCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTAGCAATCAGAGAGAAGTACAAGGAGAACAAGTTCAAGTGTGTGGCAGAGTTATGTTCACCCTCGGAAATTCCCGCAGATTATTTTGAGGACATTGATCAGCAATCATTCAACAGGTTCTTAAGAACTTAA | 1332 | 43.24 | MAHFYLKFRDELLLRRPLRFEIHENGGISPSSSPSISPQLHSSTNGFSGIYYPLLPFPSPANFATSTFSLLPFGIRLFPSPMDSSEYYKPSFPTSKKRDSEEHSLQQATANKRPVLGEITNSFIFSSSQCSFSDQEMADKDLDKEELPEVRSVDCPEKSGSSLGIYNHLRSLEMELNMKFLPNNIEKARNDDSCSTFTRWREILVDWLVEVAEEYKLVSDTLYLTISHVDRYLSWHVVDKSKLQLIGVCCMLIASKHEEISPPHVEDFCYITDNTYTKEQVLNMEREVHRFLACEGAPTVKVFLRIFTKVSLENWKAPDLQFELLCCYLAELSLLDHRCAQILPSKVAASAIFLSRFTIQPEEHPWCLALQRYSGYRASELKECILAIHDLQLNRKGSSLLAIREKYKENKFKCVAELCSPSEIPADYFEDIDQQSFNRFLRT* | 444 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5032351 | 5035656 | + | CsaV3_7G008040.1 | Csa07g00705 | 536268 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00705 | 443 | SMART | Cyclin_C_2 | 298 | 421 | IPR004367 | - | |
Csa07g00705 | 443 | Gene3D | - | 178 | 296 | - | - | |
Csa07g00705 | 443 | PANTHER | CYCLINS | 106 | 431 | IPR039361 | - | |
Csa07g00705 | 443 | Pfam | Cyclin, N-terminal domain | 172 | 292 | IPR006671 | - | |
Csa07g00705 | 443 | Gene3D | - | 165 | 417 | - | - | |
Csa07g00705 | 443 | SMART | cyclin_7 | 206 | 290 | IPR013763 | - | |
Csa07g00705 | 443 | SMART | cyclin_7 | 302 | 390 | IPR013763 | - | |
Csa07g00705 | 443 | MobiDBLite | consensus disorder prediction | 92 | 106 | - | - | |
Csa07g00705 | 443 | MobiDBLite | consensus disorder prediction | 89 | 111 | - | - | |
Csa07g00705 | 443 | CDD | CYCLIN | 298 | 389 | IPR013763 | - | |
Csa07g00705 | 443 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 374 | 443 | IPR005818 | GO:0000786|GO:0003677|GO:0006334 | |
Csa07g00705 | 443 | Pfam | Cyclin, C-terminal domain | 298 | 420 | IPR004367 | - | |
Csa07g00705 | 443 | CDD | CYCLIN | 201 | 289 | IPR013763 | - | |
Csa07g00705 | 443 | PANTHER | CYCLIN-A3-1-LIKE | 106 | 431 | - | - | |
Csa07g00705 | 443 | SUPERFAMILY | Cyclin-like | 298 | 422 | IPR036915 | - | |
Csa07g00705 | 443 | SUPERFAMILY | Cyclin-like | 179 | 293 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa06g02128 | Csa-Chr6:19014362 | Csa07g00705 | Csa-Chr7:5032351 | 2.53E-72 | dispersed | |
Csa07g00705 | Csa-Chr7:5032351 | Csa07g02205 | Csa-Chr7:20738344 | 1.87E-79 | dispersed | |
Csa02g01916 | Csa-Chr2:18053116 | Csa07g00705 | Csa-Chr7:5032351 | 1.31E-93 | wgd | |
Csa04g02456 | Csa-Chr4:24614388 | Csa07g00705 | Csa-Chr7:5032351 | 1.70E-100 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00705 | K06627 | - | csv:101213896 | 879.011 |