Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00715 ATGGGTAGCGTTGAAAGAGAGAGAAGAATAACCACAGGCTTTGCTGCAAGAGACCCATCTGGGTTTCTCTCTCCTTACACTTACGAACTCAGGGAAACAGGGCCAGAAGATGTTTACATAAGAGTTATATGCTGTGGGCTTTGTCATACTGATGTTCATCAAATCAAAAATGATCTTGGAGTGTCCAATTACCCCATGGTTCCAGGGCATGAAGTGGTTGGTGAAGTGATGGAAATTGGGGAGAATGTGAAGAAATTTAAAGTGAAGGATATTGTGGGAGTTGGATGCATAGTTGGATCTTGTAAAACTTGTGAGAGATGTGAAACTGATAGGGAACAATATTGCAATAACAAGATTTGGACTAATAATGATGTCTATACCGACGGCCGCCCTACGCAAGGCGGCTTCGCCACCGCTATGGTCGTCGACCAAAGGTTTGTGGTGAAAGTACCCGATGGCATGGCACCGGAGCAGGCAGCGGGGCTGCTATGCGCAGGCGTGACAGCGTACAGTCCTCTGAACCATTTTGGCCTAAACAAAAGTGGGCTAAGAGGAGGGATCTTAGGGCTTGGAGGAATAGGGCACATGGGGGTGAAATTGGCAAAGGCATTGGGTCACCATGTCACAGTCATAAGCTCCTCCAACAAGAAGAGGGAAGAAGCTCTAGAGCATCTCGGTGCCGACGACTACCTGGTTAGCTCCGACGAAGCTCGGATGAAACAGGCCGTCGACTCTCTTGACTACATCATCGACACCGTCCCAGCCTTTCACCCTATTGAGCTTTATCTTTCGTTGCTCAAGCTCGATGGCAAGTTGATCTTGTTGGGCGTTATTAATAAACCTCTCCAGTTCGTCTCTCCCATGGTCATCCTTGGAAGGAAGACGATCACGGGAAGTTTCATCGGGAGCATGAAGGAAACAGAGGAGATTTTGGAACTTTTCAAAGAGAGAGAATTGAGTTCAACGGTGGAAGTGGTGAAGATGGATTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGACGTTAGATATAGGTTTGTGGTGGATGTTGAGGGAAGCAAGTTCTAA 1071 46.87 MGSVERERRITTGFAARDPSGFLSPYTYELRETGPEDVYIRVICCGLCHTDVHQIKNDLGVSNYPMVPGHEVVGEVMEIGENVKKFKVKDIVGVGCIVGSCKTCERCETDREQYCNNKIWTNNDVYTDGRPTQGGFATAMVVDQRFVVKVPDGMAPEQAAGLLCAGVTAYSPLNHFGLNKSGLRGGILGLGGIGHMGVKLAKALGHHVTVISSSNKKREEALEHLGADDYLVSSDEARMKQAVDSLDYIIDTVPAFHPIELYLSLLKLDGKLILLGVINKPLQFVSPMVILGRKTITGSFIGSMKETEEILELFKERELSSTVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF* 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5097058 5099468 - CsaV3_7G008140.1 Csa07g00715 536278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00715 356 Pfam Alcohol dehydrogenase GroES-like domain 36 150 IPR013154 -
Csa07g00715 356 Gene3D - 14 351 - -
Csa07g00715 356 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 319 IPR036291 -
Csa07g00715 356 PANTHER ALDEHYDE REDUCTASE 8 355 - -
Csa07g00715 356 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 8 355 - -
Csa07g00715 356 SMART PKS_ER_names_mod 21 349 IPR020843 GO:0016491
Csa07g00715 356 SUPERFAMILY GroES-like 17 182 IPR011032 -
Csa07g00715 356 CDD CAD1 12 350 - -
Csa07g00715 356 Gene3D - 165 321 - -
Csa07g00715 356 Pfam Zinc-binding dehydrogenase 192 315 IPR013149 -
Csa07g00715 356 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g03097 Csa-Chr6:26534763 Csa07g00715 Csa-Chr7:5097058 2.88E-120 dispersed
Csa07g00715 Csa-Chr7:5097058 Csa04g01728 Csa-Chr4:16717645 1.39E-17 dispersed
Csa05g00138 Csa-Chr5:746059 Csa07g00715 Csa-Chr7:5097058 3.85E-97 transposed
Csa03g01819 Csa-Chr3:13943841 Csa07g00715 Csa-Chr7:5097058 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00715 K00083 - csv:101214622 686.797