Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00734 | ATGGATCCAAGTTCTACCGATTCCCCAATATCATCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACACCCTCAGGCTCCTGTTACCACTGGAACGAATAATGTAGCCCGTGATGCACCATCTAAGTTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAGCGACTGAAAATGCTGGGAAGTCAGCTTTTGCACGTTTCACTAGTGGCTTGGGTTTGAACTTATCTCCAAAATCTCCTGCACCCAGTGATTCCCCAGATGGAAATTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGCCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATAAAGTTCTTTGAAACACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCTGAGAGGCTATATGATGCTTCACTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGATCACAACTGTCCCCCAGTTCAACTCATAATATCATTTTGCCAAAGTGCCTATTCGTGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCCGGACAGGCTTGATGATTTCCAGTCTTCTTCTATTTTTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGATATTACCTAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGGTGCGTGCTTAGAGGGTTTCGTCTTCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCCGACCATAATGGTGTTCTGTTCTCCACTAAAGTGCATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTCGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTGTGTGGGGACTTCAAGGTTCATTTCCATGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACTGAAAATCGGAAAATGCTGTACACAAACGATCTTGATGGGTTCGATAAGAGGAAACTACCTTCCCCTGGGTTTCAGGTGGAGGTTGTTCTAGTAGATACGTCGCCCAACATGGACAACACTACCAAAAAGTCGGATGAAAGCTCAGGCTCCAAGCCTCCTACAGCTGATGGGAGTGAAGTTTCTGAAAACCAAAACAGAAAATCAGGAACTAATGATAAAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAGGAAGGAGGCAACTTCAGGTTCAGGGGTTGAAGGATCAGCTGTCAATCCGACGACTAAATCTCAAACGAGTATGACTTCATCAGACAATGTTGCGAGTTTATCTCATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTACTGCCAGCGAACGAAAAGGCGATGGAGGTGGAAGATCTGACTCTCTCCCAGAAGTTCCAAATTCAGAAAGTGAATTCAAGGCAATGGCTGCCGATGCTTCTGTTTTCACATTTGGCGACGATGAAGACTACGAGAGTGAGTAA | 1839 | 43.39 | MDPSSTDSPISSTVNSSETKPPEVHPQAPVTTGTNNVARDAPSKLSPSGITSWAKNLKISQPQSASQDGATENAGKSAFARFTSGLGLNLSPKSPAPSDSPDGNSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLILPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSKPPTADGSEVSENQNRKSGTNDKDDVFSDSESEGGSSKSRKEATSGSGVEGSAVNPTTKSQTSMTSSDNVASLSHATKQVSLGDGGAKQTATASERKGDGGGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYESE* | 613 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5208981 | 5215476 | - | CsaV3_7G008330.1 | Csa07g00734 | 536297 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00734 | 612 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 346 | 454 | IPR035892 | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Csa07g00734 | 612 | PANTHER | PHOSPHATIDYLINOSITOL 3,4,5-TRISPHOSPHATE 3-PHOSPHATASE AND PROTEIN-TYROSINE-PHOSPHATASE PTEN2A | 14 | 612 | - | - | |
Csa07g00734 | 612 | CDD | PTP_PTEN | 154 | 319 | IPR045101 | GO:0016791 | |
Csa07g00734 | 612 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 258 | 297 | IPR000387 | GO:0016311|GO:0016791 | |
Csa07g00734 | 612 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 260 | 270 | IPR016130 | GO:0016311|GO:0016791 | |
Csa07g00734 | 612 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 144 | 323 | IPR029023 | - | |
Csa07g00734 | 612 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 14 | 612 | - | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 490 | 512 | - | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 456 | 489 | - | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 86 | 114 | - | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 513 | 562 | - | - | |
Csa07g00734 | 612 | SMART | PTEN_C2_2 | 328 | 456 | IPR014020 | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 454 | 612 | - | - | |
Csa07g00734 | 612 | Gene3D | - | 328 | 458 | - | - | |
Csa07g00734 | 612 | ProSiteProfiles | C2 tensin-type domain profile. | 330 | 457 | IPR014020 | - | |
Csa07g00734 | 612 | MobiDBLite | consensus disorder prediction | 87 | 114 | - | - | |
Csa07g00734 | 612 | Gene3D | Protein tyrosine phosphatase superfamily | 129 | 326 | IPR029021 | - | |
Csa07g00734 | 612 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 157 | 325 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa07g00734 | Csa-Chr7:5208981 | Csa04g02634 | Csa-Chr4:25716565 | 7.44E-08 | dispersed | |
Csa03g03804 | Csa-Chr3:33600225 | Csa07g00734 | Csa-Chr7:5208981 | 9.64E-46 | transposed | |
Csa06g02964 | Csa-Chr6:25642802 | Csa07g00734 | Csa-Chr7:5208981 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00734 | K01110 | - | csv:101222304 | 1216.45 |