Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00757 ATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCAGGAACGACCCATGATGATTCGATGGGGTTTAATGGGGTTTCTGCAGCGAGCAAGAGGAAATGGACCCGTTTTTTGCCTTTGTTTGTGGCCATTGTGGTTATAGCAGAGATCGCTTCTCTCAGTCGGCTAGATATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCTCCGGTTTTGCAAGAAGGGAATGAAGGTGGTAGTAAAACGGGCACTGAAATTTCTGTTGATGATGGAGGGATTGATGGAATTAGCTGTGAGGAGTGGCTGGAGAAGGAGGATGCCGTGGAGTATTCTAGGGACTTCAAAAGGGAACCTGTTTTGGTTTCTGGCTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAATTTGGATTTAATCCTGGACAGCAGCCTGATGCTATATTCGGATCACCTAATCAAGGTAGTGTTGCTAGTGTACTTCGATCCATGGAATCATCACATTACTATCCTGAGAACAATATTGATTTGGCAAGACGGAAGGGTTATACCGTGGTTATGACCACTAGTCTATCATCAGATGTCCCTGTTGGATATTTTTCATGGGCAGAATACGAGATAATGGCACCAGTGCAGCCAAAGACTGAGCCTGCTCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCTCGCAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAGTTGAATATCAAAATTGATTCGTATGGTAGCTGCCACCGGAACCACGATGGAAGAGTTGACAAAGTGGAAACATTGAAGCGCTACAAGTTCAGCTTGGCATTTGAGAATTCCAATGAAGAAGATTATGTCACGGAGAAATTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGTGCTCCAAACATCAAAGAGTTTGCTCCTTCTCCTGATTCATTTTTGCATATCAAGGAGTTTTCTGATGTTGAGTCGATTGCCAAGTCCATGAAATACCTTGCTAAAAATCCCCAAATATACAATCAATCGCTAAGATGGAAGTACGACGGTCCATCTGAATCTTTCAAGGCCCTTGTTGATATGGCAGCAGTGCACTCATCCTGCCGCCTTTGCATCCATATGGCAACCATCATTCACGAGAAAGAAGAAAATAGTCCCAGGTTCAAGAAACGACCGTGCAAGTGTTCTCAAGGCTCTGAAACCGTGCATCATTTATACGTAAGGGAGAGGGGGAGGTTTGAAATGCAATCCATTTTTTTGAGGTCAGGAAATTTGACGCTGGAGGCTTTAGAATCAACGGTGCTAAAAAAGTTCAATTCTTTGAAACACGTACCAATTTGGAAGCAAGAAAGGCCTGAAAGCATAAGAGGAGGAGATGAACTAAAACTATACAGAATATATCCTGTTGGGTTGACTCAAAGGCAGGCTTTATACACCTTCAGATTCAAAGGCAATGATGATTTCAGAACTCACATAGAAACACACCCTTGTGCAAAGATGGAAATCATATTCGTCTGA 1542 43.51 MGIFSKQKIWRAGTTHDDSMGFNGVSAASKRKWTRFLPLFVAIVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPVLQEGNEGGSKTGTEISVDDGGIDGISCEEWLEKEDAVEYSRDFKREPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAIFGSPNQGSVASVLRSMESSHYYPENNIDLARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNIKIDSYGSCHRNHDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIKEFAPSPDSFLHIKEFSDVESIAKSMKYLAKNPQIYNQSLRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFKKRPCKCSQGSETVHHLYVRERGRFEMQSIFLRSGNLTLEALESTVLKKFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFKGNDDFRTHIETHPCAKMEIIFV* 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5313624 5319190 + CsaV3_7G008560.1 Csa07g00757 536320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00757 513 Gene3D - 169 362 IPR038577 -
Csa07g00757 513 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 384 IPR001503 GO:0006486|GO:0008417|GO:0016020
Csa07g00757 513 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 128 389 - -
Csa07g00757 513 PANTHER GLYCOPROTEIN 3-ALPHA-L-FUCOSYLTRANSFERASE A-LIKE ISOFORM X1 40 491 - -
Csa07g00757 513 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 40 491 IPR001503 GO:0006486|GO:0008417|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa06g00471 Csa-Chr6:4001625 Csa07g00757 Csa-Chr7:5313624 1.74E-14 transposed
Csa03g01850 Csa-Chr3:14232868 Csa07g00757 Csa-Chr7:5313624 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00757 K00753 - csv:101205170 1043.49