Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00760 ATGTCCTCTTCTCACCGCAAAACAAACAGAGACCTCACCGGAAAATCAACCAAACAGAAGCTTCATCACTCTCCCACAATGGCTTCCACAACCAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCATCAAGAAGTCGGCCACAAGAGTCTCTTACAAAGTGATGCTCTGTATCAGTACATTCTGGAAACGAGCGTTTATCCAAGGGAGCCTGAATCGATGAAGGAATTAAGAGATTTAACAGCGAAACATCCGTGGAATATAATGACGACATCGGCTGATGAAGGACAGTTTTTAAACATGCTGTTAAAGCTGATCAATGCGAAGAAGACGATGGAGATTGGAGTTTATACTGGATATTCGCTTCTGGCTACGGCCCTAGCTCTTCCTGAAGATGGAACGATTCTGGCTATGGATATTAATAGAGAAAATTATGAGTTGGGTTTGCCGGTGATTGAAAAAGCGGGCGTTGCTCATAAAATCGAGTTCAAAGAAGGACCTGCTCTCCCAGTTCTTGACGACATGGTTGCTGATAAGAAGAATCATGGAAGTTATGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATCGATTTAGTTAAAGTTGGTGGAGTGATCGGATATGACAATACCCTATGGAATGGATCGGTGGTTGCTCCACCTGATGCACCCATGCGCAAGTATGTTAGGTATTACAGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCTGCTGACCCTAGGATTGAGATTTGTATGCTTCCTGTTGGTGATGGAATCACTCTTTGCCGCCGGATCAACTAA 828 43.48 MSSSHRKTNRDLTGKSTKQKLHHSPTMASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDDMVADKKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIN* 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5335127 5337281 + CsaV3_7G008590.1 Csa07g00760 536323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00760 275 Pfam O-methyltransferase 63 274 IPR002935 GO:0008171
Csa07g00760 275 CDD AdoMet_MTases 113 214 - -
Csa07g00760 275 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 50 274 IPR002935 GO:0008171
Csa07g00760 275 Gene3D Vaccinia Virus protein VP39 49 275 IPR029063 -
Csa07g00760 275 MobiDBLite consensus disorder prediction 19 40 - -
Csa07g00760 275 PANTHER O-METHYLTRANSFERASE-RELATED 32 275 - -
Csa07g00760 275 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 54 273 IPR029063 -
Csa07g00760 275 MobiDBLite consensus disorder prediction 1 44 - -
Csa07g00760 275 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 32 275 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa04g00775 Csa-Chr4:5357975 Csa07g00760 Csa-Chr7:5335127 2.32E-48 dispersed
Csa05g02214 Csa-Chr5:24933816 Csa07g00760 Csa-Chr7:5335127 1.38E-79 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00760 K00588 - csv:101205648 558.14