Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Csa07g00760 | ATGTCCTCTTCTCACCGCAAAACAAACAGAGACCTCACCGGAAAATCAACCAAACAGAAGCTTCATCACTCTCCCACAATGGCTTCCACAACCAACGGACAAGAAGACCAGAACCAAGCCGGAAGGCATCAAGAAGTCGGCCACAAGAGTCTCTTACAAAGTGATGCTCTGTATCAGTACATTCTGGAAACGAGCGTTTATCCAAGGGAGCCTGAATCGATGAAGGAATTAAGAGATTTAACAGCGAAACATCCGTGGAATATAATGACGACATCGGCTGATGAAGGACAGTTTTTAAACATGCTGTTAAAGCTGATCAATGCGAAGAAGACGATGGAGATTGGAGTTTATACTGGATATTCGCTTCTGGCTACGGCCCTAGCTCTTCCTGAAGATGGAACGATTCTGGCTATGGATATTAATAGAGAAAATTATGAGTTGGGTTTGCCGGTGATTGAAAAAGCGGGCGTTGCTCATAAAATCGAGTTCAAAGAAGGACCTGCTCTCCCAGTTCTTGACGACATGGTTGCTGATAAGAAGAATCATGGAAGTTATGACTTCATATTTGTGGATGCTGATAAAGACAACTACATAAATTACCATAAAAGATTGATCGATTTAGTTAAAGTTGGTGGAGTGATCGGATATGACAATACCCTATGGAATGGATCGGTGGTTGCTCCACCTGATGCACCCATGCGCAAGTATGTTAGGTATTACAGGGACTTTGTGTTGGAGCTCAACAAAGCTCTTGCTGCTGACCCTAGGATTGAGATTTGTATGCTTCCTGTTGGTGATGGAATCACTCTTTGCCGCCGGATCAACTAA | 828 | 43.48 | MSSSHRKTNRDLTGKSTKQKLHHSPTMASTTNGQEDQNQAGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELRDLTAKHPWNIMTTSADEGQFLNMLLKLINAKKTMEIGVYTGYSLLATALALPEDGTILAMDINRENYELGLPVIEKAGVAHKIEFKEGPALPVLDDMVADKKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGVIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIN* | 276 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 5335127 | 5337281 | + | CsaV3_7G008590.1 | Csa07g00760 | 536323 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Csa07g00760 | 275 | Pfam | O-methyltransferase | 63 | 274 | IPR002935 | GO:0008171 | |
Csa07g00760 | 275 | CDD | AdoMet_MTases | 113 | 214 | - | - | |
Csa07g00760 | 275 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 50 | 274 | IPR002935 | GO:0008171 | |
Csa07g00760 | 275 | Gene3D | Vaccinia Virus protein VP39 | 49 | 275 | IPR029063 | - | |
Csa07g00760 | 275 | MobiDBLite | consensus disorder prediction | 19 | 40 | - | - | |
Csa07g00760 | 275 | PANTHER | O-METHYLTRANSFERASE-RELATED | 32 | 275 | - | - | |
Csa07g00760 | 275 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 54 | 273 | IPR029063 | - | |
Csa07g00760 | 275 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Csa07g00760 | 275 | PANTHER | CAFFEOYL-COA O-METHYLTRANSFERASE 1 | 32 | 275 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Csa04g00775 | Csa-Chr4:5357975 | Csa07g00760 | Csa-Chr7:5335127 | 2.32E-48 | dispersed | |
Csa05g02214 | Csa-Chr5:24933816 | Csa07g00760 | Csa-Chr7:5335127 | 1.38E-79 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Csa07g00760 | K00588 | - | csv:101205648 | 558.14 |