Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00762 ATGGAAGCTCTCTCTGTTCCTCTTTACATAACAATACTCCTTCTTCTTCTTTTCATTTTCTTTTCCATTTCATTTCTTAAAAGAACGAGAAATGAAAACCCCAAATCCCAAAATTCTCTTAAACTTCCTCCTGGTTCCATGGGATTACCTTGGATTGGTGAAACTTTGCAACTTTATTCTCAAGATCCCAATATCTTCTTCTCACAGAAACAGAGAAGATATGGTGAAATTTTTAAGACCAATATTTTGGGGTGTCCTTGTGTTATGTTGGCAAGCGCAGCCGCAGCACGGTTTGTTTTGGTCACAAACGCCCATTTATTCCGACCGACTTACCCCAAAAGTAAAGAGACGATGATCGGACCGGCGGCGCTTTTCTTTCACCAAGGAAACTACCATTCTAACCTCAGGAAGCTTGTTCTTAATTCTCTGTCTCTTGAACGTCTCAGAACTCTTGTTCCTTGTATCGAAGCTGCCGCCATTTCCGCCACCGATTCTTGGGCCGCCGCCGGCCACGTCATCAATACCTTCCTTGAAATGAAAAAGTATTCATTTGAGGTGGGAATTATAGCAGTGTTTGGAAAGCTAGAAGATGAGTACAAAGAGAAGCTAAAACAAAATTATTGCATATTAGACAAAGGCTACAACTGTTTTCCCACCAGATTACCAGGAACAGCATATTCAAAAGCATTATCAGCAAGGAAGAAGCTTAGGGAGATTCTGGGAGAGATAATAATGGAAAGAAGAGAAAAAAGAGTAACAGAGAGAGATCTAGTTGGTCATCTTTTGAACTTCAGAGACGAAAATGGTGAAAACTTAAGTGAAGATCAAATCGCCGATAATATCATCGGAGTTCTCTTCGCCGCCCAAGACACCACCGCTACTGTCCTCACTTGGATCCTTAAATATCTTCACGATAACTTCAAACTTTTCGAGGCTGTCAAGGCAGAGCAGATGGAAATTTATAGAAGAAATGGAGAAGGAAAGATGCCTCTGTCTTGGAGTCAGATTAAGGACATGCCCTTTACTCATAGGGTTGTATTAGAGAGCTTGAGGATGGCTAGCATCATATCCTTCACTTTTAGGGAGGCAGTAGTTGATGTGGAATATAAAGGGTACCTTATCCCAAAGGGCTGGAAGGTGATGCCTCTATTCAGGAATATTCATCACAACCATGAGTACTTCCCTGACCCTCATATATTTGATCCCTCTAGATTTGAGGTGGCTCCAAGGGCCAATACATTCATGCCATTTGGGAATGGAGTACATTCTTGCCCTGGAAATGAACTTGCCAAGCTGGAGATCCTCATATTGCTCCATCACCTCATTACCAAATTCAGGTGGGAAGTAGAGGGATCACAAAGTGGGGTTGAATATGGGCCATTCCCAATGCCTGTCCAAGGCCTACCCGCCAGATTTTTCAAACAAACAACAACCAACCAATACCCTTTCCTTTCATAA 1458 42.18 MEALSVPLYITILLLLLFIFFSISFLKRTRNENPKSQNSLKLPPGSMGLPWIGETLQLYSQDPNIFFSQKQRRYGEIFKTNILGCPCVMLASAAAARFVLVTNAHLFRPTYPKSKETMIGPAALFFHQGNYHSNLRKLVLNSLSLERLRTLVPCIEAAAISATDSWAAAGHVINTFLEMKKYSFEVGIIAVFGKLEDEYKEKLKQNYCILDKGYNCFPTRLPGTAYSKALSARKKLREILGEIIMERREKRVTERDLVGHLLNFRDENGENLSEDQIADNIIGVLFAAQDTTATVLTWILKYLHDNFKLFEAVKAEQMEIYRRNGEGKMPLSWSQIKDMPFTHRVVLESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNHEYFPDPHIFDPSRFEVAPRANTFMPFGNGVHSCPGNELAKLEILILLHHLITKFRWEVEGSQSGVEYGPFPMPVQGLPARFFKQTTTNQYPFLS* 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5351643 5354773 + CsaV3_7G008610.1 Csa07g00762 536325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00762 485 PANTHER CYTOCHROME P450 26 18 474 - -
Csa07g00762 485 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 18 474 - -
Csa07g00762 485 Gene3D Cytochrome P450 31 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS P450 superfamily signature 415 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS P450 superfamily signature 424 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 SUPERFAMILY Cytochrome P450 38 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00762 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Csa07g00762 485 Pfam Cytochrome P450 43 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g01949 Csa-Chr2:18263195 Csa07g00762 Csa-Chr7:5351643 1.76E-57 dispersed
Csa04g00714 Csa-Chr4:4840262 Csa07g00762 Csa-Chr7:5351643 0 dispersed
Csa07g00762 Csa-Chr7:5351643 Csa05g00809 Csa-Chr5:5807093 7.48E-86 dispersed
Csa02g01959 Csa-Chr2:18394553 Csa07g00762 Csa-Chr7:5351643 2.37E-49 wgd
Csa04g02406 Csa-Chr4:24307454 Csa07g00762 Csa-Chr7:5351643 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00762 K09843 - csv:101219389 957.207