Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00819 ATGACTTCATCTTCTTCAGAACACCCACAAATTCCCCTCCCTCTGAAACCCATCCCCGGCAGCTATGGCTTCCCCATCTTTGGACCCATCATAGATCGCTACCATTACTTCTACATCCAAGGCAGAGAAACCTTCTTCCGATCCCGAATGGCCAAGTACAATTCCACTGTGTTCCGTACCAACATGCCGCCAGGTCCCTTCATCTCTTCCAATTCCAAAGTAATCGTCCTTCTCGACGCCCTCACTTTTCCGATCCTCTTCGACACCACTAAAGTTGAGAAACGCAACGTTCTCGATGGAACTTACATGCCCTCCCTTGCCTTCACTGGAGGCATTCGTACTTGTGCTTTCTTAGACCCATCTGAAACAGAGCACTCTGTTCTCAAACGCCATTTCCTCAAATTTCTTGCCTCTCGTCACCACCAATTCATTCCTCTCTTTCGAACCTCCATCTCCGAGATGTTTGATAAACTTGAAAAGGAATTACAAAACAATAACGTCGCCAATTTTAATCCTATCAGTGATTACGCATCCTTTGATTTCATTTTCCGATTGCTTTCCGATCGCAGCCCCGATAAGAATTTCAGCTCCGAGGGACCGGGTTTAGTCGACCGATGGCTTACTATGCAGCTCGCTCCATTAGCTACACTTGGTTTGCCCAAAATTTTCAGCTGCTTTGAAGATCTCATCATCCATACTTTCCGTTTACCGTTCGCACTCGTTAAAAGCGCTTACAGGAAGCTCTACGAATCGTTTTACGAGTCGTCAGGTTCATTTCTAGACGAAGCCGAGAAACAGGGAATAAACAGAGAGAAAGCATGTCATAATTTAGTGTTTTTAGCTGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTGCCGATTCTGCTGAACTGGGTTGGATCTGCCGGCGAGGAGCTTCATCGGAAACTAGTGGGCGAAATCAGAGCCGCCGTGAAGATAGACGGGGGAATAACATTCGGGGCTTTAGAGAAGATGAGTCTGCTGAAATCCGTGGTGTACGAGGTTCTGAGGATCGACCCGCCGGTGCCGTACCAATACGCAAAGGCGAAACAAGACATTGTGATAGAGAGCCATGATTCTGCTTTCGAGATCAAGAAAGGGGAAATGATTTTTGGGTATCAGCCGATTGCGACAAAAGATCCGAAAGTGTTTGAGAATGCGGAGGAGTTTGTGGGCGAAAGGTTCGTGGGCGAGAAAGGGGAGAAGCTTTTGAAGTATGTTTATTGGTCAAATGGTCGGGAGACGGAGGAGCCAACGGCGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTGATGTGCAGAGTAGTGTTGGTGGAACTTTTCCTCCGTTATGATACGTTCACCGTCGAGGGAACCCGGTCGTCGTTGGGTTGGTCTGTGAAGGTGAAATCGTTGACTAAAGCCTAA 1437 47.88 MTSSSSEHPQIPLPLKPIPGSYGFPIFGPIIDRYHYFYIQGRETFFRSRMAKYNSTVFRTNMPPGPFISSNSKVIVLLDALTFPILFDTTKVEKRNVLDGTYMPSLAFTGGIRTCAFLDPSETEHSVLKRHFLKFLASRHHQFIPLFRTSISEMFDKLEKELQNNNVANFNPISDYASFDFIFRLLSDRSPDKNFSSEGPGLVDRWLTMQLAPLATLGLPKIFSCFEDLIIHTFRLPFALVKSAYRKLYESFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLLPILLNWVGSAGEELHRKLVGEIRAAVKIDGGITFGALEKMSLLKSVVYEVLRIDPPVPYQYAKAKQDIVIESHDSAFEIKKGEMIFGYQPIATKDPKVFENAEEFVGERFVGEKGEKLLKYVYWSNGRETEEPTAENKQCPARDLVVLMCRVVLVELFLRYDTFTVEGTRSSLGWSVKVKSLTKA* 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5756113 5757988 + CsaV3_7G010170.1 Csa07g00819 536382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00819 478 SUPERFAMILY Cytochrome P450 12 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 Pfam Cytochrome P450 306 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 Gene3D Cytochrome P450 13 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 PRINTS E-class P450 group IV signature 370 384 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 PRINTS E-class P450 group IV signature 386 404 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 PRINTS E-class P450 group IV signature 433 451 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Csa07g00819 478 PANTHER CYTOCHROME P450 26 13 459 - -
Csa07g00819 478 PANTHER HYDROPEROXIDE LYASE 13 459 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa02g02014 Csa-Chr2:18669013 Csa07g00819 Csa-Chr7:5756113 0 dispersed
Csa07g00819 Csa-Chr7:5756113 Csa01g00901 Csa-Chr1:5607244 9.57E-08 dispersed
Csa07g00818 Csa-Chr7:5749198 Csa07g00819 Csa-Chr7:5756113 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00819 K01723 - csv:101211574 961.829