Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00931 ATGGAACAGTATGAGAAAGTTGAGAAGATTGGAGAAGGAACTTATGGTGTAGTTTACAAGGCACGCGATCGTGTCACCAATGAGACTATTGCTTTGAAGAAGATCCGTTTGGAGCAAGAAGATGAGGGAGTGCCAAGCACAGCTATTCGTGAAATTTCACTGTTGAAGGAAATGCAGCACGGCAACATTGTGAGGTTACAAGATGTAGTGCATAGCGAGAAGCGTCTGTATCTTGTTTTTGAGTACCTGGATTTGGATTTGAAGAAGCATATGGATTCATCTCCTGAATTTTCAAAGGATCCACGCCAAGTAAAAATGTTTCTTTATCAAATTCTTCGTGGCATTGCATATTGTCATTCTCATAGAGTTCTTCACCGAGATCTAAAACCCCAAAATCTGCTGATTGATCGTCGTACCAATGCCCTGAAGCTTGCTGACTTTGGACTGGCAAGAGCATTTGGTATTCCTGTTAGAACATTCACGCATGAGGTGGTGACCCTTTGGTACAGAGCACCAGAAATATTGCTTGGTTCCCGACATTATTCCACCCCCGTGGATGTGTGGTCAGTGGGTTGCATATTTGCTGAGATGGTTAATCAGCGACCGTTGTTCCCTGGAGACTCTGAGATTGATGAACTGTTTAAGATATTTAGAGTTCTGGGAACTCCAAATGAAGATACGTGGCCTGGTGTTACATCTTTGCCTGATTTTAAATCTACTTTCCCCAAGTGGTCTCCCAAGTTCGCTCGTATTGTACTTGCACAGGACCTGGCTTCTGTAGTTCCTAATCTTGAAGCCGCTGGAATTGATCTTCTCTCTAAAATGCTGTGCTTGGATCCCACCAAAAGAGTCACTGCCAGGAATGCCCTTGAGCATGAATACTTCAAAGATGTTGGATATTATCTGTGTTCTTCGAGTGAAGTTGAAAAATCAATAGCCCATCTTCGCATTGGAAAAAGTTTAATACAGATCAGATTATCTGGCTTGGTAATTTCTTCAGAGATGGCACATCGGAAGCAGCCCTGCAAATCTTTTCAGGGTTGTACCTCGGGCTGTATGTCCAACCCCATGTTCGAGCAATTTCGACTCCACATTTTCTTTTTATCGCGAGTGAAATTTGTGAAGAAGAAGGGGGTATTGAGCAATAGGAATTTGTCAAAATGCTCAAGTAGGCTATTACAGGGGATAGGAACAAGCTTTAGTGGGAAATCGAAATGTAACCGTCGTCCGTTATACAGTTGTAGATGCCAACAAGCACAAAGCACAAGTGGTATGACTCCAGAAGGTGAAATGGAACATGGTTTGGGATGGTGCAGAGACATCGCGTCCAATCAACAATACACCAAATGGATCAAGTGCTTTGGAGTTTCAAGATGTTCAGTTTGCAAAACAGGAGAATGGCACAAATGGAGCAGTTAG 1419 42.92 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFSKDPRQVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDELFKIFRVLGTPNEDTWPGVTSLPDFKSTFPKWSPKFARIVLAQDLASVVPNLEAAGIDLLSKMLCLDPTKRVTARNALEHEYFKDVGYYLCSSSEVEKSIAHLRIGKSLIQIRLSGLVISSEMAHRKQPCKSFQGCTSGCMSNPMFEQFRLHIFFLSRVKFVKKKGVLSNRNLSKCSSRLLQGIGTSFSGKSKCNRRPLYSCRCQQAQSTSGMTPEGEMEHGLGWCRDIASNQQYTKWIKCFGVSRCSVCKTGEWHKWSS* 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7979653 7988170 - CsaV3_7G016240.1 Csa07g00931 536494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00931 472 ProSiteProfiles Protein kinase domain profile. 4 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00931 472 SUPERFAMILY Protein kinase-like (PK-like) 1 298 IPR011009 -
Csa07g00931 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Csa07g00931 472 Gene3D Transferase(Phosphotransferase) domain 1 86 316 - -
Csa07g00931 472 Pfam Protein kinase domain 4 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00931 472 CDD STKc_CDK1_CdkB_like 4 295 - -
Csa07g00931 472 PANTHER - 3 299 - -
Csa07g00931 472 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Csa07g00931 472 PANTHER CELL DIVISION PROTEIN KINASE 3 299 - -
Csa07g00931 472 SMART serkin_6 4 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g00931 472 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa03g00109 Csa-Chr3:854120 Csa07g00931 Csa-Chr7:7979653 3.97E-65 dispersed
Csa04g02739 Csa-Chr4:26301211 Csa07g00931 Csa-Chr7:7979653 1.95E-117 dispersed
Csa05g02740 Csa-Chr5:28145264 Csa07g00931 Csa-Chr7:7979653 7.28E-34 dispersed
Csa07g00931 Csa-Chr7:7979653 Csa03g03950 Csa-Chr3:34536277 3.05E-85 dispersed
Csa01g00416 Csa-Chr1:2598315 Csa07g00931 Csa-Chr7:7979653 2.13E-87 transposed
Csa05g02741 Csa-Chr5:28151896 Csa07g00931 Csa-Chr7:7979653 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78480 PF00069 Pkinase 5.40E-80 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00931 K02206 - csv:116405161 584.719