Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g00940 ATGCTCCGCTTTCTCTTCCTCCTCCTCTCCTCCGCCGCCGCCCACAGCGGTCACTCCGACGATGATGACTCCGCTGCCGGCGACAGCCTTTCCCCTTCCCCTAACCTCCGCTCCAAACCTCTCATCCTCGTCAAGATCACCTGCCTCATTCTCATATTCTTCGGTACCTTCATCCCCGGAATCTCCCCCTGTTTCTTCAAATGGAACGACGGCTTTCTCCTCCTCGGCACTCAGTTCGCCGGCGGCGTCTTCTTCGGCACCGCTATGATGCATTTCCTTTCCGATGCTAATGAGACCTTTCGCGATTTGACTGATAACGCCTATCCCTTCGCCTTTATGCTTGCTTGTTTAGGGTTTTTGATGACCATGGCCGCGGATTGTGTCATTTCCTATCTCTATCGCAAACCAACCGCTGATTCTTCAACCGATGTTGAACTTCGAGGAGCTGCAACTTCACCCTCAAAGTTTCAGGTCCAAAATGGCAGCAATGGGCATCATACACATCCACACCAAGCCCTCACAACAATGGGTTCATTTGGGGACAGCATTTTACTGATTGTTGCATTGTGCTTTCACTCCGTCTTTGAAGGCATCGCCATTGGAGTTGCAGAGACCAAAGCCGATGCCTGGAAAGCCCTATGGACAATCTCCCTCCACAAGGTCTTTGCAGCCATTGCCATGGGCATTGCTCTCCTCCGAATGATCCCAAACCGCCCTTTGTTGTCGAGTGCTGCCTATTCCTTTGCTTTCGCCATCTCGAGCCCCATCGGCATTGCAATCGGAATCATAATCGATGCCACGACACAAGGTGCGGTGGCAGATTGGATATTTGCAATCTCAATGGGATTGGCTTGTGGAGTGTTCATTTATGTGTCCATAAACCATCTGCTTTCAAAGGGATACACCCCTAGGGATTCAGTTCTTGTGGACAATCCAAATTACAAGTTTCTTGCTGTGCTTTTAGGAATTGGAGTTATAGCGATTGTGATGATTTGGGACACTTGA 1005 50.15 MLRFLFLLLSSAAAHSGHSDDDDSAAGDSLSPSPNLRSKPLILVKITCLILIFFGTFIPGISPCFFKWNDGFLLLGTQFAGGVFFGTAMMHFLSDANETFRDLTDNAYPFAFMLACLGFLMTMAADCVISYLYRKPTADSSTDVELRGAATSPSKFQVQNGSNGHHTHPHQALTTMGSFGDSILLIVALCFHSVFEGIAIGVAETKADAWKALWTISLHKVFAAIAMGIALLRMIPNRPLLSSAAYSFAFAISSPIGIAIGIIIDATTQGAVADWIFAISMGLACGVFIYVSINHLLSKGYTPRDSVLVDNPNYKFLAVLLGIGVIAIVMIWDT* 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8188845 8195851 + CsaV3_7G018310.1 Csa07g00940 536503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g00940 334 Pfam ZIP Zinc transporter 43 329 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Csa07g00940 334 PANTHER ZINC TRANSPORTER 11 23 333 - -
Csa07g00940 334 PANTHER ZINC/IRON TRANSPORTER 23 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g00940 Csa-Chr7:8188845 Csa07g01214 Csa-Chr7:11924273 5.52E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g00940 K14709 - csv:101208105 585.489