Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01091 ATGGAGGGTGCAATTATTAGAAGGGTTATTCCATCAGACAACAGTTGTCTCTTCAATGCTGTTGGGTATGTTATGGACCATGATAAACTCAAGGCTACTGAGCTAAGACAGGTTATAGCTGCAACCGTAGCTAGTGATCCAACAAGGTATTCCGAAGCATTTCTTGGAAAACCAAATGAGGAGTACTGTTCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCAATCGAGCTTTCGATACTATCTGAGTATTATGGGCGTGAAATAGCAGCATATGATATCCAGACAGCACGATGTGATTTATACGGTCAGGAAAAGAGGTATTCAGAAAGGGTTCTGCTGATATACGATGGACTCCACTACGATGCTTTAGTTATGTCTCCAGCTGAGGATGCTCCAGAGGAATTTGATCAGACCATTTTTTCTGTGAATAGAGACAGGACGATCGGGCCGATTGAGGAGCAAGCTCTTCATTTTGTTAAAGATCAACAAAGGAAAAGGAGATTCACCGACACTGCCAACTTTACACTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGGAAGCTGTAGAACACGCAAAAGCCACTGGCCATGTCAACTTTCAAGAGTATAGATGA 627 43.7 MEGAIIRRVIPSDNSCLFNAVGYVMDHDKLKATELRQVIAATVASDPTRYSEAFLGKPNEEYCSWILDSEKWGGAIELSILSEYYGREIAAYDIQTARCDLYGQEKRYSERVLLIYDGLHYDALVMSPAEDAPEEFDQTIFSVNRDRTIGPIEEQALHFVKDQQRKRRFTDTANFTLRCGVCQIGVIGQAEAVEHAKATGHVNFQEYR* 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10487785 10498710 - CsaV3_7G021800.1 Csa07g01091 536654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01091 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Csa07g01091 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Csa07g01091 208 Gene3D - 1 173 - -
Csa07g01091 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Csa07g01091 208 Pfam OTU-like cysteine protease 12 102 IPR003323 -
Csa07g01091 208 SUPERFAMILY Cysteine proteinases 6 125 IPR038765 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01091 K13719 - csv:101222942 424.091