Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01167 ATGAATGGTGCCACAGTAACAAATTCTGAACCAGACAACAACTCTGAATATGTTGAAGTTGATCCCACCGGAAGATATGGAAGATACAATGAAGTTCTTGGCAAAGGGGCATCGAAGACAGTTTACAGAGCTTTCGATGAATACGATGGCATTGAAGTGGCATGGAATCAAGTGAAGCTTAGTGATTTTCTTCAAACTCCTGAAGATCTTGAAAGGCTGTACAGAGAAATCCATTTGTTGAAGACATTAAAACATAACAACATAATGAAATTTTATTCTTCTTGGGTTGACATTGCTAATAGAAACATTAACTTTGTTACAGAGATGTTCACTTCTGGGACGCTTAGACAATATAGGTTGAAGCATAAGAAAGTGAATATCAGAGCTGTGAAGCATTGGTGTAGACAGATTTTAAAAGGGCTTCTCTATCTTCACAGCCATGATCCTCCTGTAATCCATAGAGACCTTAAATGTGATAATATTTTTGTAAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGTCTTGCTGCTATTCTTCGTAAATCTTATGTAGCTCGATGTGTTGGAACACCAGAGTTTATGGCTCCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATATATTCTTTTGGAATGTGCATATTAGAGATGGTTACTTTTGAATATCCATACAGTGAATGCACCCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAACCAGATGCTTTATATAAGGTAAAGGATCTCGAGGTTCGGTGTTTCGTTGAGAAATGCTTGGCTACTGTGTCAACTAGGCTGTCAGCTAGGGAGCTTTTGAATGATCCTTTTCTTCAAATTGATGGTTGTGATTCTTTATTGAGGCCAATAGATTACTATTCAGAATATGATGAAGTGAACAATTCCCTTATCAGAGGAGGGCCTTTTTATGGAACTTCTCATGGTCCTTTGGATAATGGGTATGCGAATTATTTTAGTCATGAGGCTGGGAATGGCTTGGATTACTGTCCCATTGATAACGAGGCGAGCGAAATCGATCTTTTCTCCTGTCAAGAGGATGAGCATTTGGAAGATGTTGATATCACTATTAAAGGGAGAAGAAGAGACGACGATGATATCTTTCTACGACTTCGGATTGTAGATAAAGAAGGTCGAATTCGAAACATCTACTTTCCCTTTGATTTAGAGAACGATAGTGCTTCGAGTGTTGCTAATGAGATGGTTTCTGAGCTTGACATTACTGATCAAGATGTGAAGAAGATTGCTGATATGATAGATGGTGAGATTGCTACATTGGTACCAGAGTGGAAGAAGGGAAAAAGTTTAGAGGAAACTCCAAATTGCAGTGATTCTAATGTTTGTCACAATTGTTCTTTGAACAGTTCTCTTTTGGATTACGTTTCGCCACATAATCTTGCGAAGAAGAACCTGCACATTCTTCAGTGTTCTGAAGAGCATGGTTGTGCTTCTATCCATGGACGATTTGAAGAGATTACATACCAAGTTGAGGGGTCGGAACAATTTAATGGAGACGAAAACTTGCATAGAACAACAGGAAATTCAAGTGATATCCATTATGCCGATATTTGGGCGCAACGAGATGGACCCGATGTAGTTTCTCCAGAATCTTTAGAAGCTTGCAATGAATTTGGAGCGTCGGAACAGCCGAAACTCGAGAAGGAAGAAAGCAATGTAAATATGGATGATAATGATCATCAAATGGAATTCCAAACAAGAAACTCTAGCTCATCAAATCCTTCGGAGTCCTTTGTCGATGATCACGAGAACGAAATTCGACAAGAACTAAGATGGCTCAAGGCTAAATATCAAATGCAGTTAAGAGAGCTAAGAGATCAACAATTAGGAGTCAAGACCAAATCTCTTAGCTTGCACCCAATTTCCAACCTCACCGAGACCGATAACGGAGCTTCGGTATCTTATCTTTCGCCAAACTTCAATGAAGCAGCAAAAAATAAGACTGTCCAAACATCTCTCTCCTTTGGCAAGAATATCACTTCACATTCCCCCTATGTTGCTGCTGATAACATTTTGGAGAACAAAACCTTTCAAGACAACAATGTCATTGTTGACGAGTTGAGTAGTCCCGAGCTGATTGTTACGGCCAAGAGTTTCTATACAGGAGCATTGTTTCCACATTCTCTTCAAAGAGCAACCTCACTTCCCGTTGATGCTATAGACTTTTAG 2223 39.23 MNGATVTNSEPDNNSEYVEVDPTGRYGRYNEVLGKGASKTVYRAFDEYDGIEVAWNQVKLSDFLQTPEDLERLYREIHLLKTLKHNNIMKFYSSWVDIANRNINFVTEMFTSGTLRQYRLKHKKVNIRAVKHWCRQILKGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDLEVRCFVEKCLATVSTRLSARELLNDPFLQIDGCDSLLRPIDYYSEYDEVNNSLIRGGPFYGTSHGPLDNGYANYFSHEAGNGLDYCPIDNEASEIDLFSCQEDEHLEDVDITIKGRRRDDDDIFLRLRIVDKEGRIRNIYFPFDLENDSASSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKKGKSLEETPNCSDSNVCHNCSLNSSLLDYVSPHNLAKKNLHILQCSEEHGCASIHGRFEEITYQVEGSEQFNGDENLHRTTGNSSDIHYADIWAQRDGPDVVSPESLEACNEFGASEQPKLEKEESNVNMDDNDHQMEFQTRNSSSSNPSESFVDDHENEIRQELRWLKAKYQMQLRELRDQQLGVKTKSLSLHPISNLTETDNGASVSYLSPNFNEAAKNKTVQTSLSFGKNITSHSPYVAADNILENKTFQDNNVIVDELSSPELIVTAKSFYTGALFPHSLQRATSLPVDAIDF* 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11442874 11446803 - CsaV3_7G022560.1 Csa07g01167 536730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01167 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 729 - -
Csa07g01167 740 SMART serkin_6 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01167 740 Gene3D - 362 446 - -
Csa07g01167 740 CDD STKc_WNK 25 284 - -
Csa07g01167 740 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Csa07g01167 740 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1-RELATED 2 729 - -
Csa07g01167 740 Coils Coil 605 625 - -
Csa07g01167 740 SUPERFAMILY Protein kinase-like (PK-like) 30 285 IPR011009 -
Csa07g01167 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Csa07g01167 740 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Csa07g01167 740 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 380 434 IPR024678 GO:0004674|GO:0005524
Csa07g01167 740 ProSiteProfiles Protein kinase domain profile. 27 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Csa07g01167 740 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa01g00887 Csa-Chr1:5525442 Csa07g01167 Csa-Chr7:11442874 2.41E-177 dispersed
Csa02g00334 Csa-Chr2:2295834 Csa07g01167 Csa-Chr7:11442874 0 dispersed
Csa05g00176 Csa-Chr5:1012906 Csa07g01167 Csa-Chr7:11442874 2.93E-154 dispersed
Csa06g00940 Csa-Chr6:7552851 Csa07g01167 Csa-Chr7:11442874 2.89E-113 dispersed
Csa06g01613 Csa-Chr6:13870760 Csa07g01167 Csa-Chr7:11442874 4.06E-165 dispersed
Csa07g01167 Csa-Chr7:11442874 Csa03g00442 Csa-Chr3:3747292 1.35E-119 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
78485 PF00069 Pkinase 1.30E-49 CL0016 Csa PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01167 K08867 - csv:101210511 1496.87