Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01193 ATGAGGAAGAAACGTAACGAGAAACACAAGGTAATTCTACCGCCGGATCTTCCACCAGAGCTTACCGAGGAAGAAATTGAGGTTTCCGATGAGGACTTGGAGTTTGTTAAGAAGAACCAAGACTATGCCGCATCTGTTTTTCGTATAGACACTAAATCCATAACCAAGCATGTTAAGCGGGTTGCTAATGTTGATGAAGATGCTTTGGAGGTTTTATATGAGAAGCGTCTGCGGAAGAAGCCAGTGGAGAAACAGGAGGAGGGAAATGAGCTCCAAGTTGATCCTGTGGACGCTCTTCCTGTCAAAACACTCGATGGGAAACTCTACTACCGAAGATCAAAACTATCCGATGCACCTGAAAATGGTGGGAATGAGGAGACAATGGAAGAAGATCAGGTAGATAATGGTGTATTGAAGTTAACTAAGGCAGAAAGGAGAGCAAAGCAAAAGAAAATTAAGAAGATTGCCAAGAAACAAGAGGATGTAACTCAAGCTGAAGAAGTTCAACCAACCTCACAAGCTGCTATTTTGGCCGAAGTGGTAGAAGACCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCAGAGCTTGGAATTGGGTTGCTAGCAGACCCAAATTCCAATATTAAATCTCTAAAGGAGATGCTGCAGATTGCTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTACTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCAACAGAAAAGGAGCTAGAAATTAAAGTGTCCAAGGATGTCAAGAAAATGCGATACTATGAGTCTACTCTTCTTACTGTTTATAAGGGATACCTGCAGAAGCTGATGTCATTAGAAAAATTGCCATCATTTCAGCATGTTGTTATTCGCTGTATATGTACATTGCTTGATGCAGTTCCCCATTTCAACTTTCGAGAGACATTGTTAGTAGTCGTCGTTAAAAACATAAGCTCCCCTGATGACATTGTAAGAAAACTTTGTTGTGGTGCAATTCAATCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAAGCAACTGTGGAGGCTGTCCGGTTGATTGCTGATCATGTTAAATATCATGACTGCCAATTGCATCCTGATTCCATCCAGCCTTTTGTACATCTAGTGTTTGACGAGGATCTGAGGAAAGCAGAAAAGCAAGACGAGCATAGTAAGGTAAAGAACAAAAAACACAGGAAAATAAAGAATCGTGAGGAACCGAGTCAGCAAGGGAATGATGGAAGACAGAGTACGAGGACGAAGTTTACTGAAGAGGTTGTTGCTGATTACAGGGCTGCTTCTCTTGCTCCAGATGTAATGAAGCAAAGAGAGATGCAGTCAGATACACTTTCTGCTGTATTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAACTTCTGGGCCTGAAGCAAGTAGCGCTCCATCCACAACTAGCGCATCTGGATCCCATCCTCTGCTTGTTCCATGTTTGAATGGGTTGGGAAAATTCTCGCATCTCATTGATATGGATTTCATGGGAGATCTTATGAATTATTTAAAAAGGCTTGCTTCTGGTGGGGACCATTCTTCTGAGAAACAGTCGCGATGTTTGACTGTGTCTGAGCGTCTTCAGTGTTGCATTGTGGCATTTAAAGTAATGAGGAAAAATCTTGATGCTTTGAATGTTGATCTTCAGGATTTCTTTGTCCAGCTATACAATATTGTACTTGATTACAGGCCTGGGAGGGATCAAGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTTATTAAGCGTTTGGCTACTTTCTCATTATGTTTTGGATCTGCGGAGTCGTTGGCAGCCTTGGTAACCGTAAGGCATCTTCTTCTGAAAAATGTCAAGTGCCGGAACCTTTTGGAAAACGACGCTGGTGGAGGTTCAGTGTCAGGCTCTATAGCGAAATATCAGCCATATGCAACTGATCCAAATTTGAGTGGCGCTCTTGCTTCAGTTCTTTGGGAACTTGATCTTCTTTGGAAGCATTATCATCCAGCTGTCTCTACGATGGCTGCTGGCATATCGAACATGAATAGTGCTCAAAATCAAGTATATATCTCCATTGTTTCTCCCCAACAAGCATTCAAAGACTTGTCGCTGGAACAAGAGTCCTTCAACCCACAGTTTAACGCCCGAAAAATTAATAAGAGAAAAAGAGGTTCAGAATCTTCCCAGTCTACTCTCGATACGTGTGGCACTATCGATGAAAATGAAGTGAAGGAAAAACTGTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGACAATGAAAGGTTGAGATCTGAATTAGACCGCACCACTTTGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAGAAAAACTAAAAAGTCCAGGAATGTTTAG 2478 41.32 MRKKRNEKHKVILPPDLPPELTEEEIEVSDEDLEFVKKNQDYAASVFRIDTKSITKHVKRVANVDEDALEVLYEKRLRKKPVEKQEEGNELQVDPVDALPVKTLDGKLYYRRSKLSDAPENGGNEETMEEDQVDNGVLKLTKAERRAKQKKIKKIAKKQEDVTQAEEVQPTSQAAILAEVVEDLTAEKTFESKKQKLAELGIGLLADPNSNIKSLKEMLQIAKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEIKVSKDVKKMRYYESTLLTVYKGYLQKLMSLEKLPSFQHVVIRCICTLLDAVPHFNFRETLLVVVVKNISSPDDIVRKLCCGAIQSLFINEGKHGGEATVEAVRLIADHVKYHDCQLHPDSIQPFVHLVFDEDLRKAEKQDEHSKVKNKKHRKIKNREEPSQQGNDGRQSTRTKFTEEVVADYRAASLAPDVMKQREMQSDTLSAVFETYFRILRHTMQSLTSGPEASSAPSTTSASGSHPLLVPCLNGLGKFSHLIDMDFMGDLMNYLKRLASGGDHSSEKQSRCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLDYRPGRDQGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESLAALVTVRHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYATDPNLSGALASVLWELDLLWKHYHPAVSTMAAGISNMNSAQNQVYISIVSPQQAFKDLSLEQESFNPQFNARKINKRKRGSESSQSTLDTCGTIDENEVKEKLSTRFFLLRDIKDNERLRSELDRTTLSLQLYEEYKRQKRKTKKSRNV* 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11715753 11725817 - CsaV3_7G022820.1 Csa07g01193 536756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01193 825 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 756 IPR016903 -
Csa07g01193 825 SUPERFAMILY ARM repeat 214 591 IPR016024 -
Csa07g01193 825 Pfam CBF/Mak21 family 552 707 IPR005612 -
Csa07g01193 825 PIRSF Noc3 1 824 IPR016903 -
Csa07g01193 825 MobiDBLite consensus disorder prediction 398 434 - -
Csa07g01193 825 Coils Coil 140 168 - -
Csa07g01193 825 Pfam Nucleolar complex-associated protein 193 283 IPR011501 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01193 K14834 - csv:101213821 1556.19