Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Csa07g01196 ATGGCTGCCGAAGTCAGCAGTCTGATTCGGGTACTCGCCGGGTACAAGGACGATGATAATCGCACAGCCCTCGGTAATGGCCAAGATTCAACGGCTCTCGTTACTCGCGATTTGCTCGGTCAATCTTCCAACCTTACCGACTCTCAAGAATTAGACCTCGACTTGCAAGTTCCCACCGGCTGGGAGAAAAGACTCGACTTGAAGTCAGGAAAAGTTTACATACAGAGGAGTCAAACGCCGGATTCTCCTCTGAATTCAGATTCAAAACAAATCCAAATGATCAATCAAACAGAATCCAAATTCCAGGATTTGAATTTCCCTCCATCTCCTTCAAAACGAACATTAAATCTCTTCAACGAAACCAGTTTGGATTTGAAATTGACATCGTCCCCGTCCTCCACCAATTACGCCAGCGTTTGTACTCTGGATAAGGTGAAATCTGCTCTGGAAAGGGCCGACAAGGAGTTGGTAAAGAAACGCTCTTCCCTATGGAAATCAGCTTCATCCCCGTCGTACTCCTCATCCTCATCTTCCGCGGCGGCGGGAAAGGAAATTCAAGAAGAAGAAGCGGCGGAAATTAGAAACTCGGCGGCGCCGATGGCGGTGGGTTGTCCCGGATGTTTATCGTATGTATTAGTAATGAAAAATAACCCTCGATGTCCTCGTTGCAACTCTGTTGTTCCATTGCCCACCATCAAGAAACCTCGGATTGATCTGAACATGTCCATATAA 732 46.99 MAAEVSSLIRVLAGYKDDDNRTALGNGQDSTALVTRDLLGQSSNLTDSQELDLDLQVPTGWEKRLDLKSGKVYIQRSQTPDSPLNSDSKQIQMINQTESKFQDLNFPPSPSKRTLNLFNETSLDLKLTSSPSSTNYASVCTLDKVKSALERADKELVKKRSSLWKSASSPSYSSSSSSAAAGKEIQEEEAAEIRNSAAPMAVGCPGCLSYVLVMKNNPRCPRCNSVVPLPTIKKPRIDLNMSI* 244
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11749863 11751828 - CsaV3_7G022850.1 Csa07g01196 536759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Csa07g01196 243 PANTHER PUTATIVE-RELATED 1 242 - -
Csa07g01196 243 MobiDBLite consensus disorder prediction 166 182 - -
Csa07g01196 243 PANTHER F3O9.30 1 242 - -
Csa07g01196 243 MobiDBLite consensus disorder prediction 166 187 - -
Csa07g01196 243 Coils Coil 142 162 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Csa06g01161 Csa07g01196 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Csa07g01196 Csa-Chr7:11749863 Csa03g03463 Csa-Chr3:31076160 5.72E-07 dispersed
Csa06g01161 Csa-Chr6:9710134 Csa07g01196 Csa-Chr7:11749863 4.75E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Csa07g01196 - - csv:101214550 447.203